iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108800

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377621

Gene Name

SELMODRAFT_180000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_180000	EFJ15973	EFJ15973

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-33	113.3	345	384
UBD/Beta-Prp	1.00e-48	166.8	255	386

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gHt+ v++  f ++ ++++++s Dgt+kvWD+rt ++l++
   Q: 345  GHTSYVNDAIFaTEvNRIITASSDGTVKVWDMRTTDCLQT 384
           8*******99**999**********************996 PP

UBD/Beta-Prp

   S: 130  eetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrf 230
           e+ +  h+++v +v+v+ d+ +l+sG+ D+++++W+++tg++l+++ ++h   v+ +sf+++  +++s+s d t ++  l++g+ +++++ght+ v++  f
   Q: 255  EDSFMMHEDAVLTVAVSRDSEMLASGAQDGKIKVWRIRTGQCLKRFDKAHGMGVTTVSFSRDNSQILSASFDETARIHGLKSGKQLKEFRGHTSYVNDAIF 355
           447889****************************************999**************************************************** PP
   S: 231  spnderlvsgssDgsiriWdlrsgdllktlq 261
             + +r++++ssDg++++Wd+r+ d+l+tl+
   Q: 356  ATEVNRIITASSDGTVKVWDMRTTDCLQTLK 386
           *****************************97 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MALEIEARDV IKVMLQFCKE NSLHQTFQTI QNECQVSLNS VENYDAFVSD MNDGRWDAVL 60
PQVAQLKLPK KKLEDLYEQV VLEMIEVREL DTARAILRQT QAMDYMKQEQ PERYLRLEHL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCTGG AGATCGAAGC ACGAGAGTAA GCGCTTCCCT TGTAAATGCC GATTCTCTGA 60
GCGCTGCCGC ATTCTCCAGC GTGATCAAGG TGATGCTCCA GTTTTGCAAG GAGAATTCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00668--CTLH
SM00320--WD40

KEGG

smo:SELMODRAFT_180000

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000857	Aegilops tauschii	81.94	4.00e-70	255.00
IUUC-Aly-005632	Arabidopsis lyrata	76.17	0.00e+00	857.00
IUUC-Ath-007219	Arabidopsis thaliana	76.76	0.00e+00	856.00
IUUC-Bdi-014061	Brachypodium distachyon	77.89	0.00e+00	868.00
IUUC-Bol-016332	Brassica oleracea	76.32	0.00e+00	857.00
IUUC-Bra-017612	Brassica rapa	76.17	0.00e+00	857.00
IUUC-Cel-018238	Caenorhabditis elegans	52.94	1.00e-164	572.00
IUUC-Dme-031762	Drosophila melanogaster	59.84	0.00e+00	676.00
IUUC-Gma-043928	Glycine max	78.67	0.00e+00	884.00
IUUC-Hvu-047799	Hordeum vulgare	78.89	2.00e-174	603.00
IUUC-Lpe-050740	Leersia perrieri	78.86	0.00e+00	874.00
IUUC-Mtr-057730	Medicago truncatula	77.50	0.00e+00	843.00
IUUC-Mac-065084	Musa acuminata	78.82	0.00e+00	879.00
IUUC-Oba-075507	Oryza barthii	78.82	0.00e+00	875.00
IUUC-Obr-076672	Oryza brachyantha	78.82	0.00e+00	874.00
IUUC-Ogl-077110	Oryza glaberrima	78.82	0.00e+00	875.00
IUUC-Ogu-077976	Oryza glumaepatula	78.82	0.00e+00	875.00
IUUC-Oin-079525	Oryza indica	78.82	0.00e+00	875.00
IUUC-Olo-080391	Oryza longistaminata	76.57	0.00e+00	866.00
IUUC-Oni-082778	Oryza nivara	78.82	0.00e+00	875.00
IUUC-Opu-083710	Oryza punctata	78.67	0.00e+00	875.00
IUUC-Oru-084250	Oryza rufipogon	78.82	0.00e+00	875.00
IUUC-Osa-085363	Oryza sativa	78.82	0.00e+00	875.00
IUUC-Olu-087753	Ostreococcus lucimarinus	52.04	1.00e-142	498.00
IUUC-Ppa-095325	Physcomitrella patens	80.98	0.00e+00	905.00
IUUC-Pop-098787	Populus trichocarpa	78.32	0.00e+00	880.00
IUUC-Ppe-101307	Prunus persica	78.28	0.00e+00	878.00
IUUC-Sit-110278	Setaria italica	78.28	0.00e+00	848.00
IUUC-Sly-111777	Solanum lycopersicum	77.10	0.00e+00	861.00
IUUC-Stu-112293	Solanum tuberosum	76.91	0.00e+00	860.00
IUUC-Sbi-114802	Sorghum bicolor	77.89	0.00e+00	841.00
IUUC-Tca-121653	Theobroma cacao	78.91	0.00e+00	853.00
IUUC-Tae-125609	Triticum aestivum	78.24	0.00e+00	865.00
IUUC-Tur-126197	Triticum urartu	77.60	3.00e-179	620.00
IUUC-Vvi-131127	Vitis vinifera	79.26	0.00e+00	884.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence