iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-100030

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000346

Gene Name

XM_002315178.1; POPTR_0010s20890g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s20890	POPTR_0010s20890.1	POPTR_0010s20890.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.00e-07	33.4	199	240

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+e f  + + + +pC+H++h+dC+  w       s + +CP+Cr
   Q: 199  CAVCKEAFelESEAREMPCKHIYHTDCILPW------LSIRNSCPVCR 240
           ******9977555999***************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSSPTTPSYW CYRCNRFVQV WRQDSVTCPE CESGFIEEIE NPPHMIQTEA SRERHRRLSP 60
AAGTMFMIGN RSNPHRRNRR GGAAGSGDRS PINPVIVLRG GPGGAAEDVV GDDGGRGGGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCATCTC CAACTACGCC GTCGTATTGG TGCTATAGAT GCAACCGTTT CGTTCAGGTT 60
TGGAGACAAG ACTCGGTAAC TTGCCCAGAA TGTGAATCCG GGTTCATTGA AGAAATCGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR010543--DUF1117
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF06547--DUF1117
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0010s20890g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003131	Amborella trichopoda	57.05	4.00e-79	287.00
IUUC-Aly-005732	Arabidopsis lyrata	46.69	1.00e-71	262.00
IUUC-Ath-007009	Arabidopsis thaliana	48.32	1.00e-74	273.00
IUUC-Bta-012728	Bos taurus	54.79	3.00e-19	86.70
IUUC-Bdi-014752	Brachypodium distachyon	49.85	1.00e-68	253.00
IUUC-Bol-015584	Brassica oleracea	48.32	2.00e-70	258.00
IUUC-Bra-017979	Brassica rapa	47.45	1.00e-66	246.00
IUUC-Cfa-020880	Canis familiaris	53.42	2.00e-19	87.40
IUUC-Eeu-035209	Erinaceus europaeus	53.42	7.00e-19	85.50
IUUC-Gma-043110	Glycine max	57.86	9.00e-78	283.00
IUUC-Itr-048618	Ictidomys tridecemlineatus	53.42	3.00e-21	93.60
IUUC-Mtr-057892	Medicago truncatula	56.09	7.00e-90	323.00
IUUC-Mac-065278	Musa acuminata	54.29	7.00e-77	280.00
IUUC-Osa-085474	Oryza sativa	64.98	3.00e-72	264.00
IUUC-Ppe-101788	Prunus persica	57.19	1.00e-85	309.00
IUUC-Sly-110949	Solanum lycopersicum	59.64	7.00e-88	317.00
IUUC-Stu-112338	Solanum tuberosum	59.64	9.00e-88	316.00
IUUC-Sbi-114707	Sorghum bicolor	56.34	2.00e-57	215.00
IUUC-Ttr-129081	Tursiops truncatus	54.79	2.00e-19	87.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence