iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ncr-068872

Ensembl Protein ID

EAA32397

UniProt Accession

Q9P748; EIF3F_NEUCR

Genbank Protein ID

CAB88517.2; EAA32397.1

Protein Name

Eukaryotic translation initiation factor 3 subunit F

Genbank Nucleotide ID

AL353817; CM002240

Gene Name

1A9.200; NCU01021

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
NCU01021	EAA32397	EAA32397

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	32.36	2.00e-31	134.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Neurospora crassa

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MAVDQESFVH LSRPLAPNVL GFGVSNAPLT VNIQPQAVFS IIDHAVRRDD RDTQSTRVIG 60
ALVGVRSEDG SEVEVRSTFA IPHTENEDQV EVDVEYQKNM LALTLKANPR ETLLGWYTTS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGCCACCGA GACCTACCCT CACACTGGAG TGCCATTGAC ATTTGACACC CATTCTCGGC 60
AGTGAAAAAA AGTGTAGTGT ACAACCGTAA AAAGTGACTT CTCTTTCTGC CAGTGCCCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0005829--C:cytosol
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0071540--C:eukaryotic translation initiation factor 3 complex, eIF3e
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0005634--C:nucleus
GO:0003743--F:translation initiation factor activity
GO:0031369--F:translation initiation factor binding
GO:0002183--P:cytoplasmic translational initiation
GO:0006413--P:translational initiation

KEGG

ncr:NCU01021

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	31.67	6.00e-29	119.00
IUUC-Aml-001527	Ailuropoda melanoleuca	32.25	2.00e-36	144.00
IUUC-Atr-002686	Amborella trichopoda	32.76	2.00e-28	117.00
IUUC-Apl-003977	Anas platyrhynchos	32.02	2.00e-33	133.00
IUUC-Aca-004335	Anolis carolinensis	31.27	3.00e-36	143.00
IUUC-Aly-005945	Arabidopsis lyrata	32.73	9.00e-31	125.00
IUUC-Ath-007045	Arabidopsis thaliana	32.73	6.00e-30	122.00
IUUC-Acl-008365	Aspergillus clavatus	60.13	4.00e-107	379.00
IUUC-Afl-008742	Aspergillus flavus	60.06	4.00e-102	362.00
IUUC-Afu-009030	Aspergillus fumigatus	60.46	2.00e-107	380.00
IUUC-Ani-009212	Aspergillus nidulans	61.02	2.00e-109	386.00
IUUC-Ang-009712	Aspergillus niger	61.18	2.00e-107	380.00
IUUC-Aor-009885	Aspergillus oryzae	59.74	3.00e-108	382.00
IUUC-Ate-010315	Aspergillus terreus	61.59	2.00e-101	360.00
IUUC-Ame-010801	Astyanax mexicanus	28.01	7.00e-21	92.40
IUUC-Bgr-011982	Blumeria graminis	70.23	4.00e-129	452.00
IUUC-Bta-012804	Bos taurus	32.25	1.00e-36	145.00
IUUC-Bci-013891	Botrytis cinerea	71.79	2.00e-122	430.00
IUUC-Bdi-014328	Brachypodium distachyon	31.54	2.00e-29	120.00
IUUC-Bol-015446	Brassica oleracea	34.40	3.00e-33	133.00
IUUC-Bra-016862	Brassica rapa	34.04	2.00e-32	131.00
IUUC-Cel-018171	Caenorhabditis elegans	26.44	7.00e-24	102.00
IUUC-Cja-019335	Callithrix jacchus	32.25	2.00e-36	144.00
IUUC-Cfa-020138	Canis familiaris	32.25	1.00e-36	145.00
IUUC-Cpo-022109	Cavia porcellus	31.45	1.00e-30	125.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	31.27	1.00e-37	147.00
IUUC-Csa-023994	Chlorocebus sabaeus	32.25	1.00e-36	145.00
IUUC-Cho-024351	Choloepus hoffmanni	25.36	3.00e-17	80.90
IUUC-Cin-025801	Ciona intestinalis	33.21	1.00e-41	161.00
IUUC-Csv-025805	Ciona savignyi	33.33	4.00e-41	159.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	75.16	5.00e-135	471.00
IUUC-Cne-026868	Cryptococcus neoformans	33.45	6.00e-38	149.00
IUUC-Cme-027328	Cyanidioschyzon merolae	23.91	1.00e-14	71.60
IUUC-Dre-028085	Danio rerio	30.94	1.00e-36	144.00
IUUC-Dno-030099	Dasypus novemcinctus	31.88	4.00e-36	143.00
IUUC-Dor-030324	Dipodomys ordii	28.26	4.00e-26	110.00
IUUC-Dse-031314	Dothistroma septosporum	59.26	4.00e-108	382.00
IUUC-Dme-031926	Drosophila melanogaster	27.40	8.00e-31	125.00
IUUC-Ete-032569	Echinops telfairi	28.99	6.00e-30	122.00
IUUC-Eca-033502	Equus caballus	30.71	7.00e-33	132.00
IUUC-Eeu-034883	Erinaceus europaeus	23.16	5.00e-10	55.50
IUUC-Fca-035873	Felis catus	32.25	2.00e-36	144.00
IUUC-Fal-036921	Ficedula albicollis	32.73	2.00e-39	153.00
IUUC-Fox-037765	Fusarium oxysporum	73.70	1.00e-127	447.00
IUUC-Fso-038240	Fusarium solani	74.76	3.00e-130	456.00
IUUC-Gmo-038864	Gadus morhua	30.43	2.00e-35	140.00
IUUC-Ggr-039862	Gaeumannomyces graminis	74.52	9.00e-130	454.00
IUUC-Gga-040952	Gallus gallus	32.73	3.00e-39	153.00
IUUC-Gac-041677	Gasterosteus aculeatus	28.86	2.00e-35	140.00
IUUC-Gma-043061	Glycine max	31.91	7.00e-27	112.00
IUUC-Ggo-045591	Gorilla gorilla	32.25	1.00e-36	144.00
IUUC-Hsa-046860	Homo sapiens	32.25	1.00e-36	145.00
IUUC-Hvu-047410	Hordeum vulgare	24.66	6.00e-11	58.20
IUUC-Itr-048211	Ictidomys tridecemlineatus	32.61	4.00e-37	146.00
IUUC-Lch-049410	Latimeria chalumnae	37.86	2.00e-21	94.00
IUUC-Lpe-051102	Leersia perrieri	31.25	6.00e-28	115.00
IUUC-Loc-052016	Lepisosteus oculatus	28.06	9.00e-25	105.00
IUUC-Lma-053157	Leptosphaeria maculans	57.68	6.00e-107	378.00
IUUC-Laf-054568	Loxodonta africana	31.88	3.00e-36	144.00
IUUC-Mcc-054613	Macaca mulatta	32.25	1.00e-36	144.00
IUUC-Meu-056832	Macropus eugenii	26.98	3.00e-12	63.20
IUUC-Mor-057104	Magnaporthe oryzae	73.87	1.00e-137	480.00
IUUC-Mtr-058445	Medicago truncatula	32.37	3.00e-35	140.00
IUUC-Mla-059038	Melampsora laricipopulina	36.64	4.00e-46	176.00
IUUC-Mga-059548	Meleagris gallopavo	32.49	5.00e-35	139.00
IUUC-Mvi-060520	Microbotryum violaceum	31.02	2.00e-29	121.00
IUUC-Mmr-060577	Microcebus murinus	28.57	1.00e-09	55.10
IUUC-Mdo-062376	Monodelphis domestica	31.77	3.00e-37	147.00
IUUC-Mmu-063254	Mus musculus	32.49	3.00e-36	144.00
IUUC-Mac-065635	Musa acuminata	31.77	5.00e-33	132.00
IUUC-Mpu-066314	Mustela putorius furo	32.25	1.00e-36	144.00
IUUC-Mlu-067512	Myotis lucifugus	31.88	2.00e-36	144.00
IUUC-Nfi-068262	Neosartorya fischeri	60.46	2.00e-107	380.00
IUUC-Nle-070118	Nomascus leucogenys	32.25	2.00e-36	144.00
IUUC-Opr-071228	Ochotona princeps	31.93	1.00e-32	131.00
IUUC-Ont-072600	Oreochromis niloticus	30.80	9.00e-37	145.00
IUUC-Oan-073584	Ornithorhynchus anatinus	32.49	4.00e-34	135.00
IUUC-Ocu-074542	Oryctolagus cuniculus	32.25	9.00e-37	145.00
IUUC-Oba-075923	Oryza barthii	31.82	1.00e-29	121.00
IUUC-Obr-076313	Oryza brachyantha	32.35	1.00e-28	118.00
IUUC-Ogl-076932	Oryza glaberrima	31.82	1.00e-29	121.00
IUUC-Ogu-078152	Oryza glumaepatula	31.82	1.00e-29	121.00
IUUC-Oin-079528	Oryza indica	31.82	1.00e-29	121.00
IUUC-Olo-080401	Oryza longistaminata	31.82	1.00e-29	121.00
IUUC-Ome-081553	Oryza meridionalis	31.82	1.00e-29	121.00
IUUC-Oni-082090	Oryza nivara	31.82	4.00e-30	122.00
IUUC-Opu-083583	Oryza punctata	32.72	4.00e-29	119.00
IUUC-Oru-084492	Oryza rufipogon	31.82	1.00e-29	121.00
IUUC-Osa-085383	Oryza sativa	31.82	1.00e-29	121.00
IUUC-Ola-086835	Oryzias latipes	30.88	4.00e-37	146.00
IUUC-Olu-087716	Ostreococcus lucimarinus	29.06	6.00e-23	99.00
IUUC-Oga-088886	Otolemur garnettii	32.25	7.00e-37	145.00
IUUC-Oar-090079	Ovis aries	32.25	7.00e-37	145.00
IUUC-Ptr-091457	Pan troglodytes	32.25	1.00e-36	145.00
IUUC-Pan-092317	Papio anubis	27.37	1.00e-16	77.80
IUUC-Psi-093129	Pelodiscus sinensis	32.17	2.00e-35	140.00
IUUC-Pma-094488	Petromyzon marinus	31.88	1.00e-36	144.00
IUUC-Pno-095049	Phaeosphaeria nodorum	59.55	1.00e-108	384.00
IUUC-Ppa-095341	Physcomitrella patens	31.27	1.00e-39	154.00
IUUC-Pfo-096286	Poecilia formosa	30.07	8.00e-37	145.00
IUUC-Pab-097765	Pongo abelii	32.25	1.00e-36	145.00
IUUC-Pop-099131	Populus trichocarpa	30.77	5.00e-32	129.00
IUUC-Pca-100524	Procavia capensis	25.52	3.00e-17	80.10
IUUC-Ppe-101934	Prunus persica	32.73	8.00e-37	145.00
IUUC-Pva-102577	Pteropus vampyrus	32.25	1.00e-36	145.00
IUUC-Pgr-103521	Puccinia graminis	33.55	2.00e-39	154.00
IUUC-Pte-104304	Pyrenophora teres	60.58	3.00e-109	386.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	60.58	5.00e-109	385.00
IUUC-Rno-105717	Rattus norvegicus	32.25	2.00e-36	144.00
IUUC-Sha-107190	Sarcophilus harrisii	32.09	1.00e-36	145.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	42.44	3.00e-73	266.00
IUUC-Spo-108355	Schizosaccharomyces pombe	43.23	1.00e-74	270.00
IUUC-Smo-109374	Selaginella moellendorffii	33.09	2.00e-40	157.00
IUUC-Sit-110119	Setaria italica	30.58	3.00e-29	120.00
IUUC-Sly-111570	Solanum lycopersicum	34.64	6.00e-27	112.00
IUUC-Stu-112308	Solanum tuberosum	31.44	6.00e-31	125.00
IUUC-Sar-113515	Sorex araneus	28.40	2.40e-02	30.00
IUUC-Sbi-114605	Sorghum bicolor	30.40	1.00e-28	119.00
IUUC-Sre-114906	Sporisorium reilianum	42.09	1.00e-57	214.00
IUUC-Tgu-117087	Taeniopygia guttata	31.38	6.00e-34	135.00
IUUC-Tru-117700	Takifugu rubripes	31.52	1.00e-36	144.00
IUUC-Tni-120470	Tetraodon nigroviridis	31.16	3.00e-37	146.00
IUUC-Tca-121109	Theobroma cacao	33.22	8.00e-29	118.00
IUUC-Tre-122095	Trichoderma reesei	73.23	7.00e-125	438.00
IUUC-Tvi-122580	Trichoderma virens	73.55	2.00e-125	439.00
IUUC-Tae-125129	Triticum aestivum	31.65	4.00e-30	123.00
IUUC-Tur-126658	Triticum urartu	28.11	2.00e-22	97.40
IUUC-Tme-127043	Tuber melanosporum	55.05	4.00e-96	342.00
IUUC-Tbe-127927	Tupaia belangeri	32.25	2.00e-36	144.00
IUUC-Ttr-129231	Tursiops truncatus	32.25	1.00e-36	145.00
IUUC-Uma-129578	Ustilago maydis	42.09	3.00e-57	213.00
IUUC-Vda-129730	Verticillium dahliae	72.73	2.00e-138	483.00
IUUC-Vpa-130606	Vicugna pacos	30.10	3.00e-09	53.90
IUUC-Vvi-130968	Vitis vinifera	31.85	1.00e-31	128.00
IUUC-Xtr-132203	Xenopus tropicalis	30.91	3.00e-36	143.00
IUUC-Xma-133972	Xiphophorus maculatus	30.43	3.00e-37	146.00
IUUC-Yli-134553	Yarrowia lipolytica	43.10	5.00e-62	229.00
IUUC-Zma-134941	Zea mays	28.78	5.00e-24	102.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence