iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pgr-103521

Ensembl Protein ID

EFP78631

UniProt Accession

E3K2R2; E3K2R2_PUCGT

Genbank Protein ID

EFP78631.1

Protein Name

Eukaryotic translation initiation factor 3 subunit F

Genbank Nucleotide ID

DS178270

Gene Name

PGTG_04587

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGTG_04587	EFP78631	EFP78631

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	30.19	4.00e-30	129.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Puccinia graminis

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MADSFTQPLS LPKPHSGPTS VTNVAVQPLP LAAILDHHLR RPDHQDRVFG TLLGVRNTET 60
GEVEVRSSFG VPYAATGRDV AVDSDHHRTL LELHHRVSPK EVVVGWYATS PILNSFSSLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGAGCTGTG CTGGACCATC GATCACTAGA AAAAATTATC GAGAGCAACC TCAAACATGG 60
CCGACTCGTT CACCCAACCG CTCTCATTGC CAAAGCCCCA CTCCGGCCCA ACCTCAGTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0005829--C:cytosol
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0071540--C:eukaryotic translation initiation factor 3 complex, eIF3e
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0005634--C:nucleus
GO:0003743--F:translation initiation factor activity
GO:0031369--F:translation initiation factor binding
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation
GO:0006413--P:translational initiation

KEGG

pgr:PGTG_04587

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	28.85	5.00e-25	106.00
IUUC-Aml-001527	Ailuropoda melanoleuca	30.26	7.00e-32	129.00
IUUC-Atr-002686	Amborella trichopoda	32.30	2.00e-26	110.00
IUUC-Apl-003977	Anas platyrhynchos	28.85	6.00e-25	105.00
IUUC-Aca-004335	Anolis carolinensis	29.97	2.00e-31	128.00
IUUC-Aly-005945	Arabidopsis lyrata	33.60	3.00e-31	127.00
IUUC-Ath-007045	Arabidopsis thaliana	35.20	2.00e-32	130.00
IUUC-Acl-008365	Aspergillus clavatus	34.34	5.00e-46	176.00
IUUC-Afl-008742	Aspergillus flavus	33.73	3.00e-42	163.00
IUUC-Afu-009030	Aspergillus fumigatus	34.34	2.00e-45	174.00
IUUC-Ani-009212	Aspergillus nidulans	34.34	1.00e-44	171.00
IUUC-Ang-009712	Aspergillus niger	34.23	1.00e-45	175.00
IUUC-Aor-009885	Aspergillus oryzae	34.64	8.00e-46	175.00
IUUC-Ate-010315	Aspergillus terreus	33.63	2.00e-42	164.00
IUUC-Ame-010801	Astyanax mexicanus	39.42	9.00e-15	72.00
IUUC-Bgr-011982	Blumeria graminis	33.44	2.00e-41	161.00
IUUC-Bta-012804	Bos taurus	30.19	4.00e-32	130.00
IUUC-Bci-013891	Botrytis cinerea	31.11	3.00e-36	143.00
IUUC-Bdi-014328	Brachypodium distachyon	30.03	4.00e-27	113.00
IUUC-Bol-015446	Brassica oleracea	32.69	2.00e-32	130.00
IUUC-Bra-016862	Brassica rapa	33.46	4.00e-32	130.00
IUUC-Cel-018171	Caenorhabditis elegans	25.16	3.00e-18	84.00
IUUC-Cja-019335	Callithrix jacchus	30.26	1.00e-31	129.00
IUUC-Cfa-020138	Canis familiaris	29.93	2.00e-31	127.00
IUUC-Cpo-022109	Cavia porcellus	29.64	9.00e-27	112.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	32.04	4.00e-36	143.00
IUUC-Csa-023994	Chlorocebus sabaeus	30.26	8.00e-32	129.00
IUUC-Cho-024351	Choloepus hoffmanni	30.05	5.00e-17	80.10
IUUC-Cin-025801	Ciona intestinalis	28.80	1.00e-29	121.00
IUUC-Csv-025805	Ciona savignyi	28.80	5.00e-27	112.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	31.72	1.00e-36	145.00
IUUC-Cne-026868	Cryptococcus neoformans	30.87	7.00e-34	135.00
IUUC-Cme-027328	Cyanidioschyzon merolae	25.99	7.00e-10	56.20
IUUC-Dre-028085	Danio rerio	30.52	2.00e-33	134.00
IUUC-Dno-030099	Dasypus novemcinctus	30.26	1.00e-31	128.00
IUUC-Dor-030324	Dipodomys ordii	27.96	4.00e-25	107.00
IUUC-Dse-031314	Dothistroma septosporum	35.02	4.00e-48	183.00
IUUC-Dme-031926	Drosophila melanogaster	28.71	9.00e-25	105.00
IUUC-Ete-032569	Echinops telfairi	29.06	1.00e-28	117.00
IUUC-Eca-033502	Equus caballus	28.28	3.00e-29	120.00
IUUC-Eeu-034883	Erinaceus europaeus	28.57	7.00e-07	45.10
IUUC-Fca-035873	Felis catus	30.26	8.00e-32	129.00
IUUC-Fal-036921	Ficedula albicollis	30.26	3.00e-32	130.00
IUUC-Fox-037765	Fusarium oxysporum	30.77	2.00e-31	127.00
IUUC-Fso-038240	Fusarium solani	30.77	1.00e-32	132.00
IUUC-Gmo-038864	Gadus morhua	30.94	5.00e-34	136.00
IUUC-Ggr-039862	Gaeumannomyces graminis	31.39	2.00e-31	127.00
IUUC-Gga-040952	Gallus gallus	29.93	4.00e-32	129.00
IUUC-Gac-041677	Gasterosteus aculeatus	29.97	5.00e-35	139.00
IUUC-Gma-043061	Glycine max	32.94	2.00e-28	117.00
IUUC-Ggo-045591	Gorilla gorilla	30.26	7.00e-32	129.00
IUUC-Hsa-046860	Homo sapiens	30.26	8.00e-32	129.00
IUUC-Hvu-047410	Hordeum vulgare	23.76	5.00e-10	55.10
IUUC-Itr-048211	Ictidomys tridecemlineatus	30.59	2.00e-32	130.00
IUUC-Lch-049410	Latimeria chalumnae	38.06	2.00e-20	90.10
IUUC-Lpe-051102	Leersia perrieri	30.17	5.00e-28	116.00
IUUC-Loc-052016	Lepisosteus oculatus	26.61	2.00e-19	87.80
IUUC-Lma-053157	Leptosphaeria maculans	35.26	8.00e-49	185.00
IUUC-Laf-054568	Loxodonta africana	29.93	1.00e-31	128.00
IUUC-Mcc-054613	Macaca mulatta	30.26	8.00e-32	129.00
IUUC-Meu-056832	Macropus eugenii	23.03	2.00e-06	44.30
IUUC-Mor-057104	Magnaporthe oryzae	33.12	6.00e-34	136.00
IUUC-Mtr-058445	Medicago truncatula	30.36	3.00e-32	130.00
IUUC-Mla-059038	Melampsora laricipopulina	71.43	1.00e-129	453.00
IUUC-Mga-059548	Meleagris gallopavo	29.06	5.00e-26	108.00
IUUC-Mvi-060520	Microbotryum violaceum	46.56	2.00e-60	224.00
IUUC-Mdo-062376	Monodelphis domestica	29.28	2.00e-30	124.00
IUUC-Mmu-063254	Mus musculus	30.26	1.00e-31	129.00
IUUC-Mac-065635	Musa acuminata	28.83	9.00e-30	122.00
IUUC-Mpu-066314	Mustela putorius furo	30.26	7.00e-32	129.00
IUUC-Mlu-067512	Myotis lucifugus	30.26	3.00e-32	130.00
IUUC-Nfi-068262	Neosartorya fischeri	34.34	2.00e-45	174.00
IUUC-Ncr-068872	Neurospora crassa	31.61	6.00e-36	143.00
IUUC-Nle-070118	Nomascus leucogenys	30.26	8.00e-32	129.00
IUUC-Opr-071228	Ochotona princeps	29.06	8.00e-26	108.00
IUUC-Ont-072600	Oreochromis niloticus	29.97	2.00e-33	134.00
IUUC-Oan-073584	Ornithorhynchus anatinus	28.68	9.00e-26	108.00
IUUC-Ocu-074542	Oryctolagus cuniculus	30.26	4.00e-32	130.00
IUUC-Oba-075923	Oryza barthii	29.68	1.00e-27	114.00
IUUC-Obr-076313	Oryza brachyantha	29.83	3.00e-27	113.00
IUUC-Ogl-076932	Oryza glaberrima	29.68	1.00e-27	114.00
IUUC-Ogu-078152	Oryza glumaepatula	29.68	1.00e-27	114.00
IUUC-Oin-079528	Oryza indica	29.68	1.00e-27	114.00
IUUC-Olo-080401	Oryza longistaminata	29.68	1.00e-27	114.00
IUUC-Ome-081553	Oryza meridionalis	29.68	1.00e-27	115.00
IUUC-Oni-082090	Oryza nivara	29.35	5.00e-27	112.00
IUUC-Opu-083583	Oryza punctata	29.15	2.00e-25	107.00
IUUC-Oru-084492	Oryza rufipogon	29.68	1.00e-27	114.00
IUUC-Osa-085383	Oryza sativa	29.68	1.00e-27	114.00
IUUC-Ola-086835	Oryzias latipes	28.66	2.00e-31	127.00
IUUC-Olu-087716	Ostreococcus lucimarinus	26.62	1.00e-20	91.70
IUUC-Oga-088886	Otolemur garnettii	29.93	2.00e-31	128.00
IUUC-Oar-090079	Ovis aries	30.19	3.00e-32	130.00
IUUC-Ptr-091457	Pan troglodytes	30.26	8.00e-32	129.00
IUUC-Pan-092317	Papio anubis	26.24	2.00e-12	64.30
IUUC-Psi-093129	Pelodiscus sinensis	28.30	8.00e-26	108.00
IUUC-Pma-094488	Petromyzon marinus	27.52	1.00e-31	128.00
IUUC-Pno-095049	Phaeosphaeria nodorum	35.58	5.00e-49	186.00
IUUC-Ppa-095341	Physcomitrella patens	33.65	8.00e-40	155.00
IUUC-Pfo-096286	Poecilia formosa	30.09	3.00e-35	140.00
IUUC-Pab-097765	Pongo abelii	30.26	8.00e-32	129.00
IUUC-Pop-099131	Populus trichocarpa	30.97	2.00e-29	120.00
IUUC-Pca-100524	Procavia capensis	21.77	1.00e-08	51.60
IUUC-Ppe-101934	Prunus persica	32.01	7.00e-33	132.00
IUUC-Pva-102577	Pteropus vampyrus	30.26	1.00e-31	129.00
IUUC-Pte-104304	Pyrenophora teres	35.74	5.00e-50	189.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	35.74	4.00e-50	189.00
IUUC-Rno-105717	Rattus norvegicus	30.26	9.00e-32	129.00
IUUC-Sha-107190	Sarcophilus harrisii	29.29	1.00e-29	122.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	33.13	6.00e-45	172.00
IUUC-Spo-108355	Schizosaccharomyces pombe	35.45	3.00e-47	180.00
IUUC-Smo-109374	Selaginella moellendorffii	34.19	4.00e-42	162.00
IUUC-Sit-110119	Setaria italica	29.70	9.00e-28	115.00
IUUC-Sly-111570	Solanum lycopersicum	32.00	1.00e-26	111.00
IUUC-Stu-112308	Solanum tuberosum	31.27	6.00e-30	122.00
IUUC-Sbi-114605	Sorghum bicolor	29.70	8.00e-28	116.00
IUUC-Sre-114906	Sporisorium reilianum	42.72	2.00e-56	211.00
IUUC-Tgu-117087	Taeniopygia guttata	27.92	6.00e-25	105.00
IUUC-Tru-117700	Takifugu rubripes	30.29	4.00e-34	136.00
IUUC-Tni-120470	Tetraodon nigroviridis	30.94	9.00e-35	138.00
IUUC-Tca-121109	Theobroma cacao	33.72	8.00e-30	122.00
IUUC-Tre-122095	Trichoderma reesei	30.21	7.00e-34	136.00
IUUC-Tvi-122580	Trichoderma virens	30.51	1.00e-33	135.00
IUUC-Tae-125129	Triticum aestivum	29.37	2.00e-26	110.00
IUUC-Tur-126658	Triticum urartu	25.16	7.00e-20	89.00
IUUC-Tme-127043	Tuber melanosporum	36.02	4.00e-49	186.00
IUUC-Tbe-127927	Tupaia belangeri	30.26	8.00e-32	129.00
IUUC-Ttr-129231	Tursiops truncatus	30.26	7.00e-32	129.00
IUUC-Uma-129578	Ustilago maydis	42.41	3.00e-56	210.00
IUUC-Vda-129730	Verticillium dahliae	32.37	1.00e-36	145.00
IUUC-Vvi-130968	Vitis vinifera	33.59	2.00e-33	134.00
IUUC-Xtr-132203	Xenopus tropicalis	31.80	9.00e-34	135.00
IUUC-Xma-133972	Xiphophorus maculatus	29.64	1.00e-34	138.00
IUUC-Yli-134553	Yarrowia lipolytica	32.48	1.00e-38	151.00
IUUC-Zma-134941	Zea mays	30.03	1.00e-24	105.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence