iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-130968

Ensembl Protein ID

VIT_13s0019g03470.t01

UniProt Accession

D7TMG2; D7TMG2_VITVI

Genbank Protein ID

CBI31529.3

Protein Name

Eukaryotic translation initiation factor 3 subunit F; eIF-3-epsilon

Genbank Nucleotide ID

FN595998

Gene Name

EIF2; VIT_13s0019g03470

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_13s0019g03470	VIT_13s0019g03470.t01	VIT_13s0019g03470.t01

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	41.44	3.00e-52	202.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Vitis vinifera

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MASSESAVLQ FFPSSTSLSA KVHPLVIFNI CDCYVRRPDQ AERVIGTLLG SISPDGTVDI 60
RNSYAVPHNE SSDQVALDID YHHNMLLSHQ KVNPKEVIVG WYSTGLGVTG GSALIHEFYS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCATTCTGT CCATCAGAGC AGAGATGGCG TCGAGCGAGA GTGCAGTGTT GCAGTTCTTC 60
CCATCCTCAA CGAGCTTGTC AGCGAAGGTT CACCCTCTGG TGATCTTCAA TATCTGCGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0005829--C:cytosol
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0016020--C:membrane
GO:0005634--C:nucleus
GO:0003743--F:translation initiation factor activity
GO:0031369--F:translation initiation factor binding
GO:0009793--P:embryo development ending in seed dormancy
GO:0001731--P:formation of translation preinitiation complex
GO:0009846--P:pollen germination
GO:0006446--P:regulation of translational initiation
GO:0009744--P:response to sucrose
GO:0006413--P:translational initiation

KEGG

vvi:100249540

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	67.81	1.00e-103	369.00
IUUC-Aml-001527	Ailuropoda melanoleuca	41.44	5.00e-57	213.00
IUUC-Atr-002686	Amborella trichopoda	77.66	8.00e-117	412.00
IUUC-Apl-003977	Anas platyrhynchos	40.45	3.00e-46	176.00
IUUC-Aca-004335	Anolis carolinensis	41.51	3.00e-59	221.00
IUUC-Aly-005945	Arabidopsis lyrata	78.62	5.00e-122	429.00
IUUC-Ath-007045	Arabidopsis thaliana	76.90	5.00e-119	419.00
IUUC-Acl-008365	Aspergillus clavatus	36.88	7.00e-46	176.00
IUUC-Afl-008742	Aspergillus flavus	36.52	6.00e-45	173.00
IUUC-Afu-009030	Aspergillus fumigatus	36.52	1.00e-45	176.00
IUUC-Ani-009212	Aspergillus nidulans	36.17	2.00e-44	171.00
IUUC-Ang-009712	Aspergillus niger	36.17	1.00e-44	172.00
IUUC-Aor-009885	Aspergillus oryzae	36.52	1.00e-45	176.00
IUUC-Ate-010315	Aspergillus terreus	36.17	1.00e-43	169.00
IUUC-Ame-010801	Astyanax mexicanus	49.44	3.00e-21	94.40
IUUC-Bgr-011982	Blumeria graminis	35.27	8.00e-43	166.00
IUUC-Bta-012804	Bos taurus	41.44	7.00e-57	213.00
IUUC-Bci-013891	Botrytis cinerea	34.04	2.00e-36	145.00
IUUC-Bdi-014328	Brachypodium distachyon	71.64	1.00e-106	378.00
IUUC-Bol-015446	Brassica oleracea	78.62	4.00e-124	436.00
IUUC-Bra-016862	Brassica rapa	77.93	5.00e-123	432.00
IUUC-Cel-018171	Caenorhabditis elegans	27.70	4.00e-27	114.00
IUUC-Cja-019335	Callithrix jacchus	41.44	7.00e-57	213.00
IUUC-Cfa-020138	Canis familiaris	41.06	2.00e-56	211.00
IUUC-Cpo-022109	Cavia porcellus	37.41	6.00e-45	173.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	45.39	1.00e-69	255.00
IUUC-Csa-023994	Chlorocebus sabaeus	41.44	6.00e-57	213.00
IUUC-Cho-024351	Choloepus hoffmanni	36.95	1.00e-32	132.00
IUUC-Cin-025801	Ciona intestinalis	40.91	5.00e-54	203.00
IUUC-Csv-025805	Ciona savignyi	40.81	3.00e-53	201.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	31.52	1.00e-33	136.00
IUUC-Cne-026868	Cryptococcus neoformans	34.93	4.00e-28	117.00
IUUC-Cme-027328	Cyanidioschyzon merolae	26.58	2.00e-20	92.40
IUUC-Dre-028085	Danio rerio	40.68	5.00e-57	213.00
IUUC-Dno-030099	Dasypus novemcinctus	41.44	1.00e-56	213.00
IUUC-Dor-030324	Dipodomys ordii	37.64	4.00e-46	177.00
IUUC-Dse-031314	Dothistroma septosporum	36.64	4.00e-45	174.00
IUUC-Dme-031926	Drosophila melanogaster	37.59	2.00e-51	195.00
IUUC-Ete-032569	Echinops telfairi	40.30	5.00e-53	199.00
IUUC-Eca-033502	Equus caballus	38.40	1.00e-50	192.00
IUUC-Eeu-034883	Erinaceus europaeus	35.71	5.00e-25	106.00
IUUC-Fca-035873	Felis catus	41.44	8.00e-57	213.00
IUUC-Fal-036921	Ficedula albicollis	41.06	2.00e-57	214.00
IUUC-Fox-037765	Fusarium oxysporum	30.25	8.00e-28	117.00
IUUC-Fso-038240	Fusarium solani	30.60	9.00e-29	119.00
IUUC-Gmo-038864	Gadus morhua	40.75	1.00e-58	218.00
IUUC-Ggr-039862	Gaeumannomyces graminis	30.38	6.00e-29	120.00
IUUC-Gga-040952	Gallus gallus	41.06	4.00e-57	214.00
IUUC-Gac-041677	Gasterosteus aculeatus	41.16	4.00e-61	227.00
IUUC-Gma-043061	Glycine max	82.29	2.00e-119	420.00
IUUC-Ggo-045591	Gorilla gorilla	41.44	5.00e-57	214.00
IUUC-Hsa-046860	Homo sapiens	41.44	6.00e-57	213.00
IUUC-Hvu-047410	Hordeum vulgare	72.79	2.00e-60	223.00
IUUC-Itr-048211	Ictidomys tridecemlineatus	41.83	2.00e-57	214.00
IUUC-Lch-049410	Latimeria chalumnae	39.41	6.00e-38	149.00
IUUC-Lpe-051102	Leersia perrieri	74.20	4.00e-111	393.00
IUUC-Loc-052016	Lepisosteus oculatus	39.33	3.00e-48	184.00
IUUC-Lma-053157	Leptosphaeria maculans	34.63	2.00e-44	171.00
IUUC-Laf-054568	Loxodonta africana	41.44	1.00e-56	212.00
IUUC-Mcc-054613	Macaca mulatta	41.44	5.00e-57	213.00
IUUC-Mor-057104	Magnaporthe oryzae	30.85	3.00e-29	121.00
IUUC-Mtr-058445	Medicago truncatula	81.18	4.00e-133	466.00
IUUC-Mla-059038	Melampsora laricipopulina	31.94	3.00e-32	130.00
IUUC-Mga-059548	Meleagris gallopavo	40.53	1.00e-48	185.00
IUUC-Mvi-060520	Microbotryum violaceum	28.81	9.00e-19	86.70
IUUC-Mdo-062376	Monodelphis domestica	41.44	2.00e-57	214.00
IUUC-Mmu-063254	Mus musculus	41.06	7.00e-56	209.00
IUUC-Mac-065635	Musa acuminata	71.92	8.00e-114	402.00
IUUC-Mpu-066314	Mustela putorius furo	41.44	6.00e-57	213.00
IUUC-Mlu-067512	Myotis lucifugus	40.68	3.00e-57	214.00
IUUC-Nfi-068262	Neosartorya fischeri	36.52	1.00e-45	176.00
IUUC-Ncr-068872	Neurospora crassa	32.19	6.00e-32	130.00
IUUC-Nle-070118	Nomascus leucogenys	41.44	6.00e-57	213.00
IUUC-Opr-071228	Ochotona princeps	41.41	7.00e-49	186.00
IUUC-Ont-072600	Oreochromis niloticus	41.44	1.00e-60	225.00
IUUC-Oan-073584	Ornithorhynchus anatinus	40.53	1.00e-48	185.00
IUUC-Ocu-074542	Oryctolagus cuniculus	41.83	1.00e-57	216.00
IUUC-Oba-075923	Oryza barthii	74.65	9.00e-116	408.00
IUUC-Obr-076313	Oryza brachyantha	74.65	2.00e-110	390.00
IUUC-Ogl-076932	Oryza glaberrima	74.65	9.00e-116	408.00
IUUC-Ogu-078152	Oryza glumaepatula	74.65	9.00e-116	408.00
IUUC-Oin-079528	Oryza indica	74.65	9.00e-116	408.00
IUUC-Olo-080401	Oryza longistaminata	74.65	9.00e-116	408.00
IUUC-Ome-081553	Oryza meridionalis	74.30	2.00e-115	407.00
IUUC-Oni-082090	Oryza nivara	74.65	4.00e-116	409.00
IUUC-Opu-083583	Oryza punctata	75.00	7.00e-111	392.00
IUUC-Oru-084492	Oryza rufipogon	74.65	9.00e-116	408.00
IUUC-Osa-085383	Oryza sativa	74.65	9.00e-116	408.00
IUUC-Ola-086835	Oryzias latipes	40.68	1.00e-59	221.00
IUUC-Olu-087716	Ostreococcus lucimarinus	34.96	6.00e-40	156.00
IUUC-Oga-088886	Otolemur garnettii	41.83	1.00e-57	216.00
IUUC-Oar-090079	Ovis aries	41.44	5.00e-57	213.00
IUUC-Ptr-091457	Pan troglodytes	41.44	6.00e-57	213.00
IUUC-Pan-092317	Papio anubis	39.01	6.00e-32	129.00
IUUC-Psi-093129	Pelodiscus sinensis	38.52	2.00e-50	191.00
IUUC-Pma-094488	Petromyzon marinus	42.59	1.00e-62	232.00
IUUC-Pno-095049	Phaeosphaeria nodorum	34.63	1.00e-45	176.00
IUUC-Ppa-095341	Physcomitrella patens	65.34	6.00e-106	375.00
IUUC-Pfo-096286	Poecilia formosa	40.43	9.00e-61	226.00
IUUC-Pab-097765	Pongo abelii	41.44	6.00e-57	213.00
IUUC-Pop-099131	Populus trichocarpa	85.92	4.00e-135	473.00
IUUC-Pca-100524	Procavia capensis	34.07	3.00e-33	134.00
IUUC-Ppe-101934	Prunus persica	84.56	2.00e-138	483.00
IUUC-Pva-102577	Pteropus vampyrus	41.83	2.00e-57	215.00
IUUC-Pgr-103521	Puccinia graminis	33.59	3.00e-33	134.00
IUUC-Pte-104304	Pyrenophora teres	35.34	2.00e-46	178.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	35.34	5.00e-46	177.00
IUUC-Rno-105717	Rattus norvegicus	41.44	1.00e-56	212.00
IUUC-Sha-107190	Sarcophilus harrisii	41.31	4.00e-55	207.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	32.86	6.00e-37	146.00
IUUC-Spo-108355	Schizosaccharomyces pombe	35.19	2.00e-38	151.00
IUUC-Smo-109374	Selaginella moellendorffii	68.77	2.00e-110	390.00
IUUC-Sit-110119	Setaria italica	75.38	6.00e-111	392.00
IUUC-Sly-111570	Solanum lycopersicum	81.34	4.00e-119	419.00
IUUC-Stu-112308	Solanum tuberosum	83.10	4.00e-130	456.00
IUUC-Sar-113515	Sorex araneus	43.37	5.00e-17	79.70
IUUC-Sbi-114605	Sorghum bicolor	75.76	3.00e-111	394.00
IUUC-Sre-114906	Sporisorium reilianum	34.62	6.00e-41	160.00
IUUC-Tgu-117087	Taeniopygia guttata	40.97	2.00e-48	184.00
IUUC-Tru-117700	Takifugu rubripes	42.21	4.00e-62	230.00
IUUC-Tni-120470	Tetraodon nigroviridis	41.44	2.00e-60	224.00
IUUC-Tca-121109	Theobroma cacao	85.96	3.00e-127	446.00
IUUC-Tre-122095	Trichoderma reesei	30.25	2.00e-28	119.00
IUUC-Tvi-122580	Trichoderma virens	29.89	1.00e-27	116.00
IUUC-Tae-125129	Triticum aestivum	73.96	1.00e-109	388.00
IUUC-Tur-126658	Triticum urartu	65.68	2.00e-99	353.00
IUUC-Tme-127043	Tuber melanosporum	35.59	5.00e-43	167.00
IUUC-Tbe-127927	Tupaia belangeri	41.44	8.00e-57	213.00
IUUC-Ttr-129231	Tursiops truncatus	41.44	5.00e-57	213.00
IUUC-Uma-129578	Ustilago maydis	34.74	3.00e-40	157.00
IUUC-Vda-129730	Verticillium dahliae	32.50	3.00e-34	138.00
IUUC-Xtr-132203	Xenopus tropicalis	39.92	6.00e-55	206.00
IUUC-Xma-133972	Xiphophorus maculatus	40.68	4.00e-59	220.00
IUUC-Yli-134553	Yarrowia lipolytica	31.07	3.00e-30	124.00
IUUC-Zma-134941	Zea mays	74.24	3.00e-102	363.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence