iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.8__2561__AT5G65200.1	fgenesh2_kg.8__2561__AT5G65200.1	fgenesh2_kg.8__2561__AT5G65200.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.40e-18	65.8	23	98

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk...tcPvtrqplteedlvPnltlrrliqawceenss 74
            p eflCpIs+ +M+dPvv++sG+t++r +++ + + +      +  ++++ + ++++Pnl ++++i+ wc++ ++
   Q: 23   APVEFLCPISKSVMSDPVVVSSGQTFERVCVQVCRDLNFIpklNNDDDDSQPDFSNIIPNLNMKSTIDTWCDTVGV 98
           699********************************9998876544445555567788***************9875 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGKNGRLRWN PFNHRSSSQQ QEAPVEFLCP ISKSVMSDPV VVSSGQTFER VCVQVCRDLN 60
FIPKLNNDDD DSQPDFSNII PNLNMKSTID TWCDTVGVSR PQPPDYSAVE RILRQQMPPP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGAAAATCA CGAAAGATGA ATTCAAACCC TTAATTCCTC TCAAAATAAA ACCCAAAACA 60
CTTTTCAGAT ATCAAACTCA CCACCAATCA CCGACCGTTG ATTTGTTGCA GATGGGTAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

aly:ARALYDRAFT_496745

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007165	Arabidopsis thaliana	93.53	0.00e+00	956.00
IUUC-Bol-015998	Brassica oleracea	79.00	0.00e+00	747.00
IUUC-Bra-017987	Brassica rapa	79.93	0.00e+00	745.00
IUUC-Gma-043462	Glycine max	60.04	6.00e-170	589.00
IUUC-Mtr-057660	Medicago truncatula	58.56	2.00e-139	488.00
IUUC-Oba-075532	Oryza barthii	42.12	1.00e-35	144.00
IUUC-Olo-080764	Oryza longistaminata	40.59	3.00e-32	131.00
IUUC-Ppa-095595	Physcomitrella patens	42.14	1.00e-45	177.00
IUUC-Pop-099467	Populus trichocarpa	60.00	9.00e-156	542.00
IUUC-Ppe-101245	Prunus persica	55.33	6.00e-148	516.00
IUUC-Smo-109005	Selaginella moellendorffii	37.95	2.00e-40	159.00
IUUC-Sit-110079	Setaria italica	44.54	2.00e-42	166.00
IUUC-Sly-111894	Solanum lycopersicum	50.19	1.00e-107	382.00
IUUC-Stu-112202	Solanum tuberosum	48.99	1.00e-116	413.00
IUUC-Sbi-114055	Sorghum bicolor	44.21	2.00e-35	142.00
IUUC-Tca-121713	Theobroma cacao	59.25	2.00e-153	535.00
IUUC-Vvi-131166	Vitis vinifera	56.20	2.00e-137	481.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence