iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015998

Ensembl Protein ID

Bo00615s220.1

UniProt Accession

A0A0D2ZQ50; A0A0D2ZQ50_BRAOL

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo00615s220	Bo00615s220.1	Bo00615s220.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.60e-18	67.3	30	104

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk..tcPvtrqplteedlvPnltlrrliqawceenss 74
           +p ef+CpIs+++M+dPvv++sG+t++r +++ + + +     + ++++p + ++++Pn  ++++i+awc++ ++
   Q: 30   PPIEFICPISKTIMSDPVVVSSGQTFERVCVQICRDLDFIpkLNELNDSPPDFSTVIPNRNMKSTIEAWCDSVGV 104
           799********************************88877669999************************98765 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MGKSGRLRWN PFSHRSSSSS RQEHNQQQQP PIEFICPISK TIMSDPVVVS SGQTFERVCV 60
QICRDLDFIP KLNELNDSPP DFSTVIPNRN MKSTIEAWCD SVGVERPHPP DYSAVETNLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTAAAA GCGGACGGCT AAGATGGAAC CCTTTCAGCC ACAGATCCTC TTCTTCATCA 60
AGACAGGAAC ACAACCAACA ACAGCAACCT CCAATTGAAT TCATATGTCC AATTTCAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005887	Arabidopsis lyrata	80.07	0.00e+00	816.00
IUUC-Ath-007165	Arabidopsis thaliana	78.80	0.00e+00	807.00
IUUC-Bra-017987	Brassica rapa	92.57	0.00e+00	837.00
IUUC-Gma-043462	Glycine max	56.40	7.00e-151	526.00
IUUC-Mtr-057660	Medicago truncatula	55.04	1.00e-125	443.00
IUUC-Ppa-095595	Physcomitrella patens	39.22	8.00e-43	168.00
IUUC-Pop-099467	Populus trichocarpa	58.44	4.00e-145	507.00
IUUC-Ppe-101245	Prunus persica	51.61	2.00e-132	465.00
IUUC-Sit-110079	Setaria italica	44.98	2.00e-38	153.00
IUUC-Sly-111894	Solanum lycopersicum	48.26	2.00e-99	356.00
IUUC-Stu-112202	Solanum tuberosum	48.76	4.00e-105	375.00
IUUC-Tca-121713	Theobroma cacao	57.01	2.00e-150	525.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence