iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-116366

Ensembl Protein ID

ENSSSCP00000017375.2

UniProt Accession

F1SHW8; F1SHW8_PIG

Genbank Protein ID

ENSSSCP00000017375

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU570760

Gene Name

STAM2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000016399.2	ENSSSCT00000017856.2	ENSSSCP00000017375.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/VHS	2.00e-55	186.6	4	133
UBD/SH3	4.60e-17	62.0	193	246

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/VHS

   S: 1    atselvtsedwelileicdliqetkegakdalralrkrinnknphvalraLtlLdscvsnCgkkfhvevaskdlleelrell.knenep 88
           at+e++t+edw+li++icd++++t +gakd+l+a++kr+n+k phval+aLtlL++cv+nCgk+fh+ev+s+d+++e+r+++ +++++p
   Q: 4    ATNEYNTTEDWSLIMDICDKVGSTPNGAKDCLKAIMKRVNHKVPHVALQALTLLGACVANCGKIFHLEVCSRDFATEVRAVIkNKKAHP 92
           799*******************************************************************************77788** PP
   S: 89   kvieKlkalivsWadelknepalslivaliktlkeeGlefp 129
           kv+eKlk+l+v+W++e++++p++sli+a+ik++keeG++fp
   Q: 93   KVCEKLKSLMVEWSEEFQKDPQFSLISATIKSMKEEGITFP 133
           ****************************************8 PP

UBD/SH3

   S: 3    kekvqvlydyeaqnddeLtlkkGdvvlviekeeqdegWlkgvkelegkrGlfPenFve 60
            +kv++lyd+ea++d+eLt+k+G+++ v+  ++ d++W+kg  e +   GlfP+nFv+
   Q: 193  ARKVRALYDFEAVEDNELTFKHGEIIIVL--DDSDANWWKG--ENHRGIGLFPSNFVT 246
           689*************************9..99********..899999*******97 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

IEKATNEYNT TEDWSLIMDI CDKVGSTPNG AKDCLKAIMK RVNHKVPHVA LQALTLLGAC 60
VANCGKIFHL EVCSRDFATE VRAVIKNKKA HPKVCEKLKS LMVEWSEEFQ KDPQFSLISA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTATATAAG ATGTCCTAAT TTTTGTGTAT GCTTATCTCT TATAGAAAAG GCCACAAATG 60
AGTATAACAC TACAGAAGAT TGGAGTCTTA TTATGGACAT ATGCGATAAA GTTGGAAGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR008942--ENTH_VHS
IPR001452--SH3_domain
IPR003903--UIM_dom
IPR002014--VHS_dom

PROSITE

PS50002--SH3
PS50330--UIM
PS50179--VHS

Pfam

PF00018--SH3_1
PF02809--UIM
PF00790--VHS

PRINTS

PR00452--SH3DOMAIN

SMART

SM00326--SH3
SM00726--UIM
SM00288--VHS

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0006886--P:intracellular protein transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000135	Aegilops tauschii	34.31	3.00e-18	87.00
IUUC-Aml-002079	Ailuropoda melanoleuca	93.64	0.00e+00	930.00
IUUC-Atr-003138	Amborella trichopoda	38.53	7.00e-15	75.50
IUUC-Apl-003548	Anas platyrhynchos	77.69	0.00e+00	734.00
IUUC-Aca-004991	Anolis carolinensis	76.79	0.00e+00	676.00
IUUC-Ago-007874	Ashbya gossypii	24.35	5.00e-31	128.00
IUUC-Acl-008046	Aspergillus clavatus	25.55	3.00e-35	143.00
IUUC-Afl-008621	Aspergillus flavus	25.65	7.00e-40	158.00
IUUC-Afu-008826	Aspergillus fumigatus	25.99	2.00e-29	123.00
IUUC-Ani-009419	Aspergillus nidulans	26.40	2.00e-36	147.00
IUUC-Ang-009580	Aspergillus niger	31.72	1.00e-37	150.00
IUUC-Ate-010532	Aspergillus terreus	26.09	2.00e-36	147.00
IUUC-Ame-011913	Astyanax mexicanus	59.56	5.00e-162	563.00
IUUC-Bgr-012113	Blumeria graminis	27.92	8.00e-41	161.00
IUUC-Bta-013115	Bos taurus	92.61	0.00e+00	667.00
IUUC-Bci-013955	Botrytis cinerea	31.15	2.00e-34	140.00
IUUC-Bdi-015001	Brachypodium distachyon	38.53	2.00e-18	87.40
IUUC-Cja-018846	Callithrix jacchus	90.41	0.00e+00	927.00
IUUC-Cfa-020589	Canis familiaris	94.02	0.00e+00	940.00
IUUC-Cpo-021460	Cavia porcellus	87.67	0.00e+00	880.00
IUUC-Csa-023912	Chlorocebus sabaeus	93.84	0.00e+00	952.00
IUUC-Cho-024297	Choloepus hoffmanni	92.80	0.00e+00	912.00
IUUC-Cgl-026648	Colletotrichum gloeosporioides	26.84	9.00e-39	154.00
IUUC-Cne-027007	Cryptococcus neoformans	32.33	2.00e-17	84.00
IUUC-Cme-027127	Cyanidioschyzon merolae	28.45	5.70e-02	33.50
IUUC-Dre-027454	Danio rerio	60.77	5.00e-160	556.00
IUUC-Dno-029182	Dasypus novemcinctus	91.83	0.00e+00	930.00
IUUC-Dor-030949	Dipodomys ordii	82.23	0.00e+00	701.00
IUUC-Dse-031527	Dothistroma septosporum	30.62	7.00e-36	145.00
IUUC-Eca-033544	Equus caballus	93.83	0.00e+00	910.00
IUUC-Eeu-035224	Erinaceus europaeus	83.51	0.00e+00	786.00
IUUC-Fca-035958	Felis catus	94.63	0.00e+00	950.00
IUUC-Fal-037193	Ficedula albicollis	70.60	0.00e+00	642.00
IUUC-Fox-037748	Fusarium oxysporum	34.23	8.00e-39	154.00
IUUC-Ggr-040048	Gaeumannomyces graminis	25.57	3.00e-37	149.00
IUUC-Gga-041158	Gallus gallus	75.10	0.00e+00	734.00
IUUC-Gma-043428	Glycine max	40.37	1.00e-18	87.80
IUUC-Ggo-044661	Gorilla gorilla	90.30	0.00e+00	918.00
IUUC-Hsa-046959	Homo sapiens	93.64	0.00e+00	949.00
IUUC-Hvu-047351	Hordeum vulgare	36.50	4.00e-20	92.80
IUUC-Itr-048399	Ictidomys tridecemlineatus	93.21	0.00e+00	710.00
IUUC-Lch-050505	Latimeria chalumnae	70.38	0.00e+00	714.00
IUUC-Lpe-051031	Leersia perrieri	37.96	9.00e-19	88.20
IUUC-Loc-051737	Lepisosteus oculatus	62.72	2.00e-175	608.00
IUUC-Lma-053287	Leptosphaeria maculans	27.51	8.00e-38	151.00
IUUC-Laf-053943	Loxodonta africana	91.24	0.00e+00	927.00
IUUC-Mcc-055609	Macaca mulatta	93.84	0.00e+00	952.00
IUUC-Meu-056575	Macropus eugenii	67.60	0.00e+00	634.00
IUUC-Mor-056972	Magnaporthe oryzae	30.96	4.00e-36	146.00
IUUC-Mpo-057476	Magnaporthe poae	25.76	1.00e-37	151.00
IUUC-Mtr-057784	Medicago truncatula	31.47	4.00e-18	86.30
IUUC-Mla-059162	Melampsora laricipopulina	27.51	2.00e-24	107.00
IUUC-Mga-059462	Meleagris gallopavo	75.50	0.00e+00	727.00
IUUC-Mvi-060560	Microbotryum violaceum	32.84	7.00e-20	92.40
IUUC-Mmr-061756	Microcebus murinus	78.27	0.00e+00	699.00
IUUC-Mdo-062314	Monodelphis domestica	86.51	0.00e+00	879.00
IUUC-Mmu-064020	Mus musculus	84.18	0.00e+00	834.00
IUUC-Mac-064432	Musa acuminata	35.98	7.00e-22	98.60
IUUC-Mpu-066320	Mustela putorius furo	93.22	0.00e+00	899.00
IUUC-Mlu-067472	Myotis lucifugus	90.02	0.00e+00	915.00
IUUC-Nfi-068568	Neosartorya fischeri	30.68	2.00e-34	140.00
IUUC-Ncr-068765	Neurospora crassa	26.33	7.00e-38	152.00
IUUC-Nle-070035	Nomascus leucogenys	93.04	0.00e+00	943.00
IUUC-Opr-070584	Ochotona princeps	67.99	0.00e+00	650.00
IUUC-Ont-072419	Oreochromis niloticus	60.20	2.00e-155	542.00
IUUC-Oan-072727	Ornithorhynchus anatinus	83.19	9.00e-148	515.00
IUUC-Ocu-074576	Oryctolagus cuniculus	81.14	0.00e+00	809.00
IUUC-Oba-075578	Oryza barthii	39.45	4.00e-20	92.80
IUUC-Obr-076278	Oryza brachyantha	35.42	7.00e-20	92.00
IUUC-Ogl-077232	Oryza glaberrima	39.45	4.00e-20	92.80
IUUC-Ogu-078454	Oryza glumaepatula	39.45	4.00e-20	92.80
IUUC-Oin-080097	Oryza indica	39.45	4.00e-20	93.20
IUUC-Olo-080861	Oryza longistaminata	37.61	1.00e-18	87.80
IUUC-Ome-081795	Oryza meridionalis	39.45	4.00e-20	92.80
IUUC-Oni-082061	Oryza nivara	39.45	4.00e-20	93.20
IUUC-Opu-083866	Oryza punctata	38.41	2.00e-19	90.10
IUUC-Oru-084443	Oryza rufipogon	39.45	4.00e-20	92.80
IUUC-Osa-085724	Oryza sativa	39.45	4.00e-20	92.80
IUUC-Oga-089079	Otolemur garnettii	75.69	0.00e+00	740.00
IUUC-Oar-089306	Ovis aries	94.57	0.00e+00	959.00
IUUC-Ptr-090536	Pan troglodytes	93.24	0.00e+00	946.00
IUUC-Pan-092172	Papio anubis	93.84	0.00e+00	956.00
IUUC-Psi-094026	Pelodiscus sinensis	76.49	0.00e+00	711.00
IUUC-Pno-094911	Phaeosphaeria nodorum	32.32	4.00e-36	145.00
IUUC-Ppa-095533	Physcomitrella patens	31.39	9.00e-15	75.10
IUUC-Pfo-096200	Poecilia formosa	60.00	1.00e-155	542.00
IUUC-Pab-098151	Pongo abelii	94.09	0.00e+00	928.00
IUUC-Pop-099695	Populus trichocarpa	36.70	1.00e-15	78.20
IUUC-Pca-100361	Procavia capensis	69.40	0.00e+00	647.00
IUUC-Ppe-101544	Prunus persica	34.41	6.00e-20	92.00
IUUC-Pva-103093	Pteropus vampyrus	92.25	0.00e+00	924.00
IUUC-Pgr-103679	Puccinia graminis	34.19	5.00e-18	85.90
IUUC-Ptt-103709	Puccinia triticina	34.19	3.00e-18	86.70
IUUC-Pte-104251	Pyrenophora teres	28.12	3.00e-38	152.00
IUUC-Pyt-104694	Pyrenophora triticirepentis	28.78	3.00e-38	153.00
IUUC-Rno-105275	Rattus norvegicus	82.76	0.00e+00	792.00
IUUC-Sce-106209	Saccharomyces cerevisiae	27.38	4.00e-28	119.00
IUUC-Sha-107090	Sarcophilus harrisii	84.77	0.00e+00	861.00
IUUC-Sja-107859	Schizosaccharomyces japonicus	30.85	9.00e-29	120.00
IUUC-Spo-108333	Schizosaccharomyces pombe	29.78	2.00e-31	129.00
IUUC-Ssl-108525	Sclerotinia sclerotiorum	30.77	9.00e-33	134.00
IUUC-Sit-110727	Setaria italica	37.96	2.00e-20	94.00
IUUC-Sar-113125	Sorex araneus	79.84	0.00e+00	756.00
IUUC-Sbi-114813	Sorghum bicolor	37.23	2.00e-19	90.90
IUUC-Sre-115010	Sporisorium reilianum	36.22	2.00e-19	90.10
IUUC-Tgu-117414	Taeniopygia guttata	78.05	0.00e+00	665.00
IUUC-Tru-117683	Takifugu rubripes	54.93	1.00e-140	493.00
IUUC-Tsy-119199	Tarsius syrichta	92.05	0.00e+00	930.00
IUUC-Tni-120765	Tetraodon nigroviridis	65.25	4.00e-139	487.00
IUUC-Tca-121503	Theobroma cacao	34.31	1.00e-16	81.60
IUUC-Tre-122061	Trichoderma reesei	26.53	1.00e-38	154.00
IUUC-Tvi-122365	Trichoderma virens	27.06	3.00e-39	156.00
IUUC-Tae-123748	Triticum aestivum	34.31	2.00e-18	87.00
IUUC-Tur-126261	Triticum urartu	37.23	8.00e-17	82.40
IUUC-Tbe-127343	Tupaia belangeri	89.20	0.00e+00	698.00
IUUC-Ttr-128960	Tursiops truncatus	91.67	0.00e+00	924.00
IUUC-Uma-129613	Ustilago maydis	36.22	2.00e-19	90.50
IUUC-Vda-129759	Verticillium dahliae	30.63	2.00e-35	143.00
IUUC-Vpa-130600	Vicugna pacos	89.17	0.00e+00	876.00
IUUC-Vvi-131199	Vitis vinifera	35.77	5.00e-20	92.40
IUUC-Xtr-132472	Xenopus tropicalis	69.14	0.00e+00	674.00
IUUC-Xma-133716	Xiphophorus maculatus	59.67	5.00e-150	523.00
IUUC-Yli-134682	Yarrowia lipolytica	32.12	6.00e-17	82.00
IUUC-Zma-134959	Zea mays	41.28	3.00e-21	97.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence