iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099966

UUCD1 version

UUC-PoT-01523

Ensembl Protein ID

POPTR_0002s00910.1

UniProt Accession

B9NDM5; B9GPR4; B9NDM5_POPTR

Genbank Protein ID

EEE81184.2

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_593178; POPTR_0002s00910g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s00910	POPTR_0002s00910.1	POPTR_0002s00910.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.30e-26	92.8	29	105

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           ++++f+Cp+++++MrdPv+l++G+t++r++Iekw++++++      cP+t+++l+++dl P+++lr++i++w ++n+
   Q: 29   IYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFKECKEsgrklVCPLTQKELKSTDLNPSIALRNTIEEWTARNE 105
           799********************************777777778*****************************9986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAESWDGSYD PGSQSDDSHY FERLRVEPIY DAFVCPLTKQ VMRDPVTLEN GQTFEREAIE 60
KWFKECKESG RKLVCPLTQK ELKSTDLNPS IALRNTIEEW TARNEAVQLD MACRSLNLGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACAGCACCCT TTTTCTCCCT TCCCCTACTT CTCCTTCCTC TCGGTTTCCT ACTCATATTA 60
GTTTCCCATT TCGAATAAGG GAAATAAGCC CTAATAATCG AAGTTGAATC GGCCTCATGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR001263--PInositide-3_kin_accessory_dom
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0002s00910g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000143	Aegilops tauschii	66.26	0.00e+00	1078.00
IUUC-Atr-002916	Amborella trichopoda	67.57	0.00e+00	1094.00
IUUC-Aly-005480	Arabidopsis lyrata	67.49	0.00e+00	1034.00
IUUC-Ath-007569	Arabidopsis thaliana	67.61	0.00e+00	1038.00
IUUC-Bdi-014487	Brachypodium distachyon	64.45	0.00e+00	1045.00
IUUC-Bol-016384	Brassica oleracea	65.79	0.00e+00	949.00
IUUC-Bra-017058	Brassica rapa	65.91	0.00e+00	976.00
IUUC-Gma-044318	Glycine max	82.78	0.00e+00	1377.00
IUUC-Hvu-047783	Hordeum vulgare	66.01	0.00e+00	1080.00
IUUC-Lpe-050971	Leersia perrieri	65.81	0.00e+00	1019.00
IUUC-Mtr-058511	Medicago truncatula	81.67	0.00e+00	1332.00
IUUC-Mac-064911	Musa acuminata	66.05	0.00e+00	1033.00
IUUC-Oba-075225	Oryza barthii	65.44	0.00e+00	1055.00
IUUC-Obr-076103	Oryza brachyantha	65.68	0.00e+00	1019.00
IUUC-Ogl-077529	Oryza glaberrima	65.44	0.00e+00	1053.00
IUUC-Ogu-078735	Oryza glumaepatula	65.19	0.00e+00	1051.00
IUUC-Oin-079422	Oryza indica	65.31	0.00e+00	1039.00
IUUC-Olo-080644	Oryza longistaminata	60.27	0.00e+00	941.00
IUUC-Ome-081455	Oryza meridionalis	65.31	0.00e+00	1051.00
IUUC-Oni-082690	Oryza nivara	65.19	0.00e+00	1036.00
IUUC-Opu-083157	Oryza punctata	65.68	0.00e+00	1055.00
IUUC-Oru-085058	Oryza rufipogon	65.31	0.00e+00	1039.00
IUUC-Osa-086000	Oryza sativa	65.31	0.00e+00	1039.00
IUUC-Ppa-096021	Physcomitrella patens	49.69	0.00e+00	770.00
IUUC-Ppe-101973	Prunus persica	83.03	0.00e+00	1333.00
IUUC-Smo-109219	Selaginella moellendorffii	49.69	0.00e+00	729.00
IUUC-Sit-110490	Setaria italica	66.30	0.00e+00	1054.00
IUUC-Sly-111702	Solanum lycopersicum	80.18	0.00e+00	1199.00
IUUC-Stu-111962	Solanum tuberosum	79.70	0.00e+00	1296.00
IUUC-Sbi-113974	Sorghum bicolor	55.25	0.00e+00	840.00
IUUC-Tca-121113	Theobroma cacao	85.98	0.00e+00	1412.00
IUUC-Tae-125341	Triticum aestivum	56.27	0.00e+00	822.00
IUUC-Tur-126573	Triticum urartu	65.77	0.00e+00	1070.00
IUUC-Vvi-131623	Vitis vinifera	84.99	0.00e+00	1428.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence