iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tgu-117091

Ensembl Protein ID

ENSTGUP00000003831.1

UniProt Accession

H0YZU6; H0YZU6_TAEGU

Genbank Protein ID

ENSTGUP00000003831

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01051826

Gene Name

PHF2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000003709.1	ENSTGUT00000003873.1	ENSTGUP00000003831.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.70e-10	39.3	6	55

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C +C+ +++ ++ ++eC+ C++wfH  C++ + eee p+ + + Cp+C++
   Q: 6    VYC-ICRLPYDVTRFMIECDACKDWFHGSCVGVE-EEEAPDIDIYHCPNCEK 55
           69*.******************************.*******99******86 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

MATVPVYCIC RLPYDVTRFM IECDACKDWF HGSCVGVEEE EAPDIDIYHC PNCEKTHGKS 60
TLKKKRNWHK HDTSQTTEVK PVQNGSQVFI KELRSRTFPS AEDIVVKVPG SQLTAEYLEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGACGG TGCCCGTCTA TTGCATCTGC CGGCTGCCCT ACGACGTGAC CCGCTTCATG 60
ATCGAGTGCG ACGCCTGCAA GGACTGGTTC CACGGCAGGT AACGCACCGC GCCCGGCACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003347--JmjC_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51184--JMJC
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF02373--JmjC
PF00628--PHD

SMART

SM00558--JmjC
SM00249--PHD

Gene Ontology

GO:0005829--C:cytosol
GO:0000776--C:kinetochore
GO:0005730--C:nucleolus
GO:0032454--F:histone demethylase activity (H3-K9 specific)
GO:0005506--F:iron ion binding
GO:0003713--F:transcription coactivator activity
GO:0008270--F:zinc ion binding
GO:0061188--P:negative regulation of chromatin silencing at rDNA

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002427	Ailuropoda melanoleuca	61.92	0.00e+00	658.00
IUUC-Atr-002986	Amborella trichopoda	46.00	7.00e-12	63.20
IUUC-Aca-005043	Anolis carolinensis	92.89	0.00e+00	914.00
IUUC-Aly-005443	Arabidopsis lyrata	35.29	2.00e-11	62.00
IUUC-Afl-008579	Aspergillus flavus	27.86	2.00e-28	120.00
IUUC-Ame-010945	Astyanax mexicanus	60.55	0.00e+00	659.00
IUUC-Bdi-014153	Brachypodium distachyon	43.64	1.00e-12	66.20
IUUC-Cja-018757	Callithrix jacchus	58.09	5.00e-159	554.00
IUUC-Cfa-021156	Canis familiaris	61.51	0.00e+00	659.00
IUUC-Cpo-022284	Cavia porcellus	62.80	0.00e+00	662.00
IUUC-Cre-022934	Chlamydomonas reinhardtii	46.00	5.00e-10	57.00
IUUC-Csa-023515	Chlorocebus sabaeus	62.80	0.00e+00	664.00
IUUC-Dre-028285	Danio rerio	83.30	0.00e+00	777.00
IUUC-Dno-029446	Dasypus novemcinctus	63.44	0.00e+00	667.00
IUUC-Ete-032380	Echinops telfairi	61.30	0.00e+00	662.00
IUUC-Eca-034302	Equus caballus	62.80	0.00e+00	662.00
IUUC-Fca-035578	Felis catus	62.18	0.00e+00	666.00
IUUC-Fal-037017	Ficedula albicollis	98.51	0.00e+00	1000.00
IUUC-Gmo-038789	Gadus morhua	61.38	0.00e+00	648.00
IUUC-Gga-040290	Gallus gallus	97.23	0.00e+00	990.00
IUUC-Gac-041666	Gasterosteus aculeatus	59.91	0.00e+00	633.00
IUUC-Gma-042998	Glycine max	34.25	1.00e-11	62.40
IUUC-Ggo-044712	Gorilla gorilla	62.31	0.00e+00	659.00
IUUC-Hsa-046760	Homo sapiens	82.43	0.00e+00	1416.00
IUUC-Hvu-047723	Hordeum vulgare	32.10	6.00e-11	60.50
IUUC-Lch-049793	Latimeria chalumnae	62.69	0.00e+00	665.00
IUUC-Lpe-051400	Leersia perrieri	45.45	1.00e-12	65.90
IUUC-Loc-051927	Lepisosteus oculatus	85.15	0.00e+00	860.00
IUUC-Laf-053656	Loxodonta africana	61.51	0.00e+00	663.00
IUUC-Mcc-055658	Macaca mulatta	62.80	0.00e+00	664.00
IUUC-Mtr-057679	Medicago truncatula	46.00	2.00e-11	62.00
IUUC-Mmr-061132	Microcebus murinus	81.67	0.00e+00	1439.00
IUUC-Mdo-062097	Monodelphis domestica	63.23	0.00e+00	641.00
IUUC-Mmu-063458	Mus musculus	90.06	0.00e+00	917.00
IUUC-Mac-065355	Musa acuminata	45.10	8.00e-12	63.20
IUUC-Mpu-066429	Mustela putorius furo	61.97	0.00e+00	664.00
IUUC-Mlu-067746	Myotis lucifugus	62.10	0.00e+00	653.00
IUUC-Nle-070143	Nomascus leucogenys	62.80	0.00e+00	665.00
IUUC-Ont-071935	Oreochromis niloticus	79.08	0.00e+00	753.00
IUUC-Oan-073654	Ornithorhynchus anatinus	64.35	0.00e+00	649.00
IUUC-Ocu-074417	Oryctolagus cuniculus	63.01	0.00e+00	665.00
IUUC-Oba-075188	Oryza barthii	39.76	1.00e-12	65.90
IUUC-Obr-076844	Oryza brachyantha	45.45	4.00e-12	64.30
IUUC-Ogl-077260	Oryza glaberrima	45.45	4.00e-12	64.30
IUUC-Ogu-078663	Oryza glumaepatula	45.45	1.00e-12	65.90
IUUC-Oin-079894	Oryza indica	45.45	1.00e-12	65.90
IUUC-Olo-080411	Oryza longistaminata	45.45	5.00e-13	67.00
IUUC-Ome-081623	Oryza meridionalis	45.45	2.00e-12	65.10
IUUC-Oni-082587	Oryza nivara	45.45	1.00e-12	65.90
IUUC-Opu-083591	Oryza punctata	43.64	3.00e-12	64.30
IUUC-Oru-084597	Oryza rufipogon	45.45	1.00e-12	65.90
IUUC-Osa-086057	Oryza sativa	45.45	1.00e-12	65.90
IUUC-Ola-087236	Oryzias latipes	80.75	0.00e+00	785.00
IUUC-Olu-087802	Ostreococcus lucimarinus	50.00	2.00e-14	71.20
IUUC-Oga-088662	Otolemur garnettii	63.01	0.00e+00	661.00
IUUC-Oar-090332	Ovis aries	63.01	0.00e+00	663.00
IUUC-Ptr-091328	Pan troglodytes	78.76	0.00e+00	1015.00
IUUC-Pan-092122	Papio anubis	62.80	0.00e+00	664.00
IUUC-Pma-094621	Petromyzon marinus	61.73	4.00e-176	610.00
IUUC-Pfo-096227	Poecilia formosa	80.04	0.00e+00	772.00
IUUC-Pab-097635	Pongo abelii	65.17	3.00e-80	293.00
IUUC-Pop-098853	Populus trichocarpa	36.00	2.00e-12	65.10
IUUC-Pca-100779	Procavia capensis	57.01	9.00e-77	281.00
IUUC-Ppe-101818	Prunus persica	36.76	2.00e-11	61.60
IUUC-Pva-102839	Pteropus vampyrus	53.98	1.00e-153	537.00
IUUC-Rno-105933	Rattus norvegicus	61.94	0.00e+00	658.00
IUUC-Sja-107763	Schizosaccharomyces japonicus	33.33	3.00e-47	182.00
IUUC-Spo-108120	Schizosaccharomyces pombe	32.22	3.00e-50	193.00
IUUC-Sit-110411	Setaria italica	47.46	5.00e-14	70.50
IUUC-Sly-110932	Solanum lycopersicum	36.36	3.00e-12	64.70
IUUC-Stu-112357	Solanum tuberosum	40.68	1.00e-11	62.40
IUUC-Sbi-114098	Sorghum bicolor	49.09	1.00e-13	68.90
IUUC-Ssc-115645	Sus scrofa	63.01	0.00e+00	663.00
IUUC-Tru-118118	Takifugu rubripes	74.39	0.00e+00	764.00
IUUC-Tsy-119214	Tarsius syrichta	64.76	0.00e+00	628.00
IUUC-Tni-120632	Tetraodon nigroviridis	78.17	0.00e+00	819.00
IUUC-Tca-121518	Theobroma cacao	48.00	3.00e-12	64.30
IUUC-Tae-125802	Triticum aestivum	43.64	1.00e-12	67.00
IUUC-Tur-126461	Triticum urartu	43.64	5.00e-13	66.60
IUUC-Tbe-128138	Tupaia belangeri	59.89	1.00e-142	500.00
IUUC-Ttr-128194	Tursiops truncatus	89.13	0.00e+00	914.00
IUUC-Vpa-130595	Vicugna pacos	65.67	4.00e-80	292.00
IUUC-Vvi-131614	Vitis vinifera	48.00	4.00e-12	64.30
IUUC-Xtr-132307	Xenopus tropicalis	65.39	0.00e+00	661.00
IUUC-Xma-134037	Xiphophorus maculatus	80.04	0.00e+00	773.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence