iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121678

Ensembl Protein ID

EOY34571

UniProt Accession

A0A061GYH6; A0A061GYH6_THECC

Genbank Protein ID

EOY34571.1

Protein Name

Typical subtype, Leucine-rich repeat, Ubiquitin, Ubiquitin supergroup isoform 2

Genbank Nucleotide ID

CM001887

Gene Name

TCM_042197

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_042197	EOY34571	EOY34571
TCM_042197	EOY34570	EOY34570
TCM_042197	EOY34572	EOY34572

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_PIM	8.30e-15	55.4	12	83

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           +++tvk+ +g+ +++++ +d+t+++lK ++++ ++v p  qkLI++Gk L D+ tL+e  + +g +++l+ ++
   Q: 12   INITVKF-SGRSIPISIAKDSTIKDLKSHLQSLTNVLPRGQKLIFKGKLLVDAMTLKESEVMNGAKLMLMASQ 83
           679****.9999**********************************************************875 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSKGEGENCG NINITVKFSG RSIPISIAKD STIKDLKSHL QSLTNVLPRG QKLIFKGKLL 60
VDAMTLKESE VMNGAKLMLM ASQGLHQGGG PLLKEAQTRP ISRRSEDEYK KSDARSEVVM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCATCACTA CTCACTAAGA TGGGAATCCC CTCCTTCATT ACAGATTATT TCCCCTGTTT 60
CCTTCTGTTT TCCAACTCCC AATTTCTCTG CTGTAAATCC TGATTTCCTC CCCTGTAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR003591--Leu-rich_rpt_typical-subtyp
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS51450--LRR
PS50053--UBIQUITIN_2

Pfam

PF13855--LRR_8
PF00240--ubiquitin

SMART

SM00369--LRR_TYP
SM00213--UBQ

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001663	Ailuropoda melanoleuca	35.51	4.00e-14	72.40
IUUC-Atr-002772	Amborella trichopoda	50.56	1.00e-62	231.00
IUUC-Apl-004029	Anas platyrhynchos	38.83	5.00e-15	75.10
IUUC-Aly-005571	Arabidopsis lyrata	66.48	2.00e-133	469.00
IUUC-Ath-006853	Arabidopsis thaliana	67.23	1.00e-141	495.00
IUUC-Ame-011792	Astyanax mexicanus	30.62	5.00e-16	79.00
IUUC-Bta-012937	Bos taurus	38.78	5.00e-14	72.40
IUUC-Bdi-014104	Brachypodium distachyon	60.22	1.00e-115	408.00
IUUC-Bol-016339	Brassica oleracea	65.92	3.00e-132	463.00
IUUC-Bra-016795	Brassica rapa	66.48	9.00e-134	468.00
IUUC-Cel-018313	Caenorhabditis elegans	27.66	2.00e-07	49.70
IUUC-Cja-019359	Callithrix jacchus	36.45	3.00e-14	72.80
IUUC-Cfa-020908	Canis familiaris	39.02	1.00e-15	77.40
IUUC-Cpo-021744	Cavia porcellus	40.00	9.00e-16	78.20
IUUC-Cre-022825	Chlamydomonas reinhardtii	27.37	1.00e-20	93.20
IUUC-Csa-023784	Chlorocebus sabaeus	35.51	9.00e-14	71.20
IUUC-Cho-024851	Choloepus hoffmanni	33.08	5.00e-06	44.70
IUUC-Cin-025241	Ciona intestinalis	32.23	2.00e-13	70.10
IUUC-Csv-025951	Ciona savignyi	34.59	5.00e-16	77.80
IUUC-Dre-027424	Danio rerio	30.67	5.00e-15	75.50
IUUC-Dno-028857	Dasypus novemcinctus	35.92	3.00e-14	72.80
IUUC-Dor-030397	Dipodomys ordii	34.57	6.00e-08	52.00
IUUC-Ete-032265	Echinops telfairi	36.72	2.00e-10	59.70
IUUC-Eca-033505	Equus caballus	37.38	6.00e-15	75.50
IUUC-Eeu-035089	Erinaceus europaeus	38.30	5.00e-13	68.90
IUUC-Fca-036318	Felis catus	35.96	6.00e-15	75.50
IUUC-Fal-037299	Ficedula albicollis	31.94	2.00e-13	70.50
IUUC-Gmo-038494	Gadus morhua	31.29	9.00e-16	78.20
IUUC-Gga-041180	Gallus gallus	28.15	8.00e-16	78.20
IUUC-Gma-043846	Glycine max	67.79	1.00e-119	422.00
IUUC-Ggo-045293	Gorilla gorilla	35.51	1.00e-13	71.20
IUUC-Hsa-046865	Homo sapiens	35.51	6.00e-14	72.00
IUUC-Hvu-047769	Hordeum vulgare	58.26	9.00e-119	419.00
IUUC-Itr-048290	Ictidomys tridecemlineatus	34.58	1.00e-13	70.90
IUUC-Lch-049921	Latimeria chalumnae	30.25	6.00e-08	51.20
IUUC-Loc-052396	Lepisosteus oculatus	41.35	2.00e-13	70.10
IUUC-Laf-054274	Loxodonta africana	36.45	9.00e-15	74.70
IUUC-Mcc-055328	Macaca mulatta	35.51	1.00e-13	71.20
IUUC-Meu-056407	Macropus eugenii	40.22	2.00e-14	73.90
IUUC-Mtr-057683	Medicago truncatula	63.51	7.00e-124	436.00
IUUC-Mga-059898	Meleagris gallopavo	33.33	2.00e-15	77.00
IUUC-Mmr-061558	Microcebus murinus	36.84	3.00e-15	76.60
IUUC-Mdo-062877	Monodelphis domestica	31.88	2.00e-16	80.10
IUUC-Mmu-063525	Mus musculus	38.78	6.00e-14	72.00
IUUC-Mac-064501	Musa acuminata	61.14	1.00e-119	422.00
IUUC-Mpu-066491	Mustela putorius furo	33.64	1.00e-13	70.90
IUUC-Mlu-068182	Myotis lucifugus	38.74	4.00e-15	76.30
IUUC-Nle-069349	Nomascus leucogenys	34.58	2.00e-13	70.10
IUUC-Opr-070326	Ochotona princeps	39.05	3.00e-15	76.60
IUUC-Oan-072957	Ornithorhynchus anatinus	37.27	5.00e-16	79.00
IUUC-Ocu-074328	Oryctolagus cuniculus	33.59	7.00e-10	57.80
IUUC-Obr-076454	Oryza brachyantha	57.42	7.00e-121	426.00
IUUC-Ogl-077480	Oryza glaberrima	60.22	2.00e-125	441.00
IUUC-Oin-079319	Oryza indica	65.78	1.00e-85	309.00
IUUC-Ome-081910	Oryza meridionalis	58.40	3.00e-120	425.00
IUUC-Osa-085755	Oryza sativa	50.38	2.00e-34	137.00
IUUC-Ola-087391	Oryzias latipes	36.64	4.00e-12	65.10
IUUC-Oga-088129	Otolemur garnettii	36.45	2.00e-14	73.90
IUUC-Oar-089353	Ovis aries	38.78	9.00e-14	71.20
IUUC-Ptr-091511	Pan troglodytes	35.51	8.00e-14	71.60
IUUC-Pan-092251	Papio anubis	35.51	7.00e-14	72.00
IUUC-Psi-093778	Pelodiscus sinensis	31.02	3.00e-15	76.30
IUUC-Pma-094158	Petromyzon marinus	26.84	1.00e-11	63.90
IUUC-Ppa-095427	Physcomitrella patens	40.28	2.00e-76	278.00
IUUC-Pfo-096094	Poecilia formosa	28.83	2.00e-13	70.90
IUUC-Pab-098187	Pongo abelii	35.92	8.00e-14	71.60
IUUC-Pop-099197	Populus trichocarpa	72.53	8.00e-156	541.00
IUUC-Pca-100526	Procavia capensis	34.58	7.00e-13	68.60
IUUC-Ppe-101851	Prunus persica	70.77	2.00e-144	504.00
IUUC-Pva-102557	Pteropus vampyrus	38.78	2.00e-14	73.20
IUUC-Pgr-103622	Puccinia graminis	29.81	2.00e-08	55.10
IUUC-Pyt-104751	Pyrenophora triticirepentis	36.25	3.00e-08	53.10
IUUC-Rno-105540	Rattus norvegicus	38.54	8.00e-14	71.60
IUUC-Sha-107485	Sarcophilus harrisii	31.82	2.00e-16	80.50
IUUC-Spo-108106	Schizosaccharomyces pombe	28.57	1.00e-07	51.60
IUUC-Smo-109452	Selaginella moellendorffii	40.00	5.00e-49	187.00
IUUC-Sit-110214	Setaria italica	59.78	6.00e-112	396.00
IUUC-Sly-111052	Solanum lycopersicum	62.70	4.00e-133	466.00
IUUC-Stu-112067	Solanum tuberosum	63.39	7.00e-134	469.00
IUUC-Sar-113098	Sorex araneus	31.54	2.00e-10	59.70
IUUC-Sbi-114187	Sorghum bicolor	59.50	4.00e-110	390.00
IUUC-Ssc-116105	Sus scrofa	32.48	3.00e-15	76.30
IUUC-Tgu-116857	Taeniopygia guttata	32.48	2.00e-15	75.90
IUUC-Tru-117930	Takifugu rubripes	36.59	9.00e-14	71.20
IUUC-Tsy-119382	Tarsius syrichta	36.76	2.00e-08	53.50
IUUC-Tni-120714	Tetraodon nigroviridis	36.59	3.00e-15	76.30
IUUC-Tae-125328	Triticum aestivum	59.38	6.00e-121	426.00
IUUC-Tbe-128087	Tupaia belangeri	30.13	1.00e-07	49.70
IUUC-Ttr-128282	Tursiops truncatus	36.45	2.00e-14	73.60
IUUC-Vda-129866	Verticillium dahliae	35.71	1.00e-04	41.20
IUUC-Vpa-130740	Vicugna pacos	36.73	8.00e-13	68.20
IUUC-Vvi-131120	Vitis vinifera	71.15	1.00e-148	518.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence