iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-130895

UUCD1 version

UUC-ViV-00072

Ensembl Protein ID

VIT_09s0002g05080.t01

UniProt Accession

F6HX37; F6HX37_VITVI

Genbank Protein ID

CCB59507.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596494

Gene Name

VIT_09s0002g05080

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_09s0002g05080	VIT_09s0002g05080.t01	VIT_09s0002g05080.t01

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	50.55	2.00e-97	352.00	IUUC-Ath-006894

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MDFIPGLPDD VARQCLIRVS YENFSTIAAV CRVWKSEVED PDFFRQRKTA GYTRPVFAMA 60
QARVVPNRSS GGMKCPTLAY RVTLLDLETG NWSELPPVPG FSDGLPMFCQ LVGVESELVV 120

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Nucleotide Sequence
(Fasta)

TCTTATATTC AACTGTTTCT CTCTTCATCA TCTTCTTCTT CCTTCTTCTT CCTCTGTAGC 60
TACCTGCTCT CTCAATTTAT TTCAATCCCC CATCTCAATT TATTCAAATA TTTCTCTGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR015915--Kelch-typ_b-propeller
IPR006652--Kelch_1

Pfam

PF01344--Kelch_1

SMART

SM00612--Kelch

Gene Ontology

GO:0005737--C:cytoplasm
GO:0019005--C:SCF ubiquitin ligase complex
GO:0031625--F:ubiquitin protein ligase binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0030162--P:regulation of proteolysis

KEGG

vvi:100241136

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002518	Amborella trichopoda	41.06	1.00e-75	275.00
IUUC-Aly-005798	Arabidopsis lyrata	48.61	1.00e-102	365.00
IUUC-Ath-006894	Arabidopsis thaliana	50.55	1.00e-104	372.00
IUUC-Afu-008891	Aspergillus fumigatus	44.44	3.10e+00	25.40
IUUC-Bdi-014921	Brachypodium distachyon	45.45	5.00e-83	300.00
IUUC-Bol-015429	Brassica oleracea	49.86	2.00e-96	345.00
IUUC-Bra-017279	Brassica rapa	49.59	6.00e-104	369.00
IUUC-Gmo-039392	Gadus morhua	27.71	2.00e-10	60.10
IUUC-Gma-042989	Glycine max	56.02	6.00e-117	412.00
IUUC-Hvu-047097	Hordeum vulgare	43.92	1.00e-72	266.00
IUUC-Lpe-050853	Leersia perrieri	43.35	3.00e-73	267.00
IUUC-Mtr-058274	Medicago truncatula	50.97	9.00e-105	372.00
IUUC-Mac-065270	Musa acuminata	50.55	1.00e-103	369.00
IUUC-Oba-075850	Oryza barthii	42.92	2.00e-22	98.60
IUUC-Obr-076711	Oryza brachyantha	50.24	1.00e-55	208.00
IUUC-Ogl-077502	Oryza glaberrima	43.54	6.00e-65	240.00
IUUC-Ogu-078360	Oryza glumaepatula	44.48	1.00e-61	229.00
IUUC-Oin-079816	Oryza indica	43.27	1.00e-63	236.00
IUUC-Ome-081176	Oryza meridionalis	43.80	9.00e-75	273.00
IUUC-Oni-082714	Oryza nivara	43.54	6.00e-65	240.00
IUUC-Opu-083272	Oryza punctata	43.12	1.00e-75	275.00
IUUC-Oru-084247	Oryza rufipogon	43.54	2.00e-68	251.00
IUUC-Osa-085360	Oryza sativa	43.54	6.00e-65	240.00
IUUC-Oga-088855	Otolemur garnettii	28.09	4.00e-09	55.50
IUUC-Ppa-095543	Physcomitrella patens	33.78	2.00e-47	182.00
IUUC-Pop-099836	Populus trichocarpa	57.30	3.00e-119	420.00
IUUC-Ppe-101539	Prunus persica	58.71	4.00e-130	456.00
IUUC-Smo-109140	Selaginella moellendorffii	41.60	4.00e-54	203.00
IUUC-Sit-110557	Setaria italica	39.84	1.00e-55	209.00
IUUC-Sly-110913	Solanum lycopersicum	58.71	1.00e-121	428.00
IUUC-Stu-112061	Solanum tuberosum	58.15	9.00e-121	425.00
IUUC-Sbi-114056	Sorghum bicolor	42.49	5.00e-67	247.00
IUUC-Tca-121805	Theobroma cacao	59.78	4.00e-126	443.00
IUUC-Tae-125904	Triticum aestivum	45.79	2.00e-73	268.00
IUUC-Vda-129739	Verticillium dahliae	37.93	6.20e+00	24.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence