iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017857

Ensembl Protein ID

Bra033820.1-P

UniProt Accession

M4EYC8; M4EYC8_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra033820	Bra033820.1	Bra033820.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.30e-35	120.1	253	325

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+CpIsle+MrdPv++++G+ty+r++Iekw++ g++tcP+t+q lt+++l+Pn++lr+li +wce+n++
   Q: 253  IPDDFRCPISLEMMRDPVIVSTGQTYERTCIEKWIEAGHSTCPKTQQALTSTTLTPNYVLRSLIAQWCEANDI 325
           89********************************************************************987 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MEEEKGAVAQ SLIDVVNEIS SVSEYRTTVK KLCSNLARRL KLLVPMFEEI RESNEPISED 60
TLKTLVSLKE AMSSAKNHLK FCSQGSKIYL VMEREQVTSK LLEVSVQLEQ SLSKIPYEDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGAAG AGAAAGGTGC GGTTGCGCAG AGCTTAATTG ATGTAGTGAA CGAGATTTCG 60
TCCGTTTCCG AGTACCGTAC AACGGTGAAG AAGCTCTGCA GTAATTTGGC GAGGAGGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000439	Aegilops tauschii	61.76	0.00e+00	637.00
IUUC-Aly-005681	Arabidopsis lyrata	92.28	0.00e+00	1201.00
IUUC-Ath-007618	Arabidopsis thaliana	92.59	0.00e+00	1206.00
IUUC-Bdi-014829	Brachypodium distachyon	58.70	0.00e+00	663.00
IUUC-Bol-015254	Brassica oleracea	98.34	0.00e+00	1242.00
IUUC-Gma-043064	Glycine max	69.94	0.00e+00	900.00
IUUC-Hvu-047052	Hordeum vulgare	59.68	5.00e-173	600.00
IUUC-Lpe-051284	Leersia perrieri	56.84	0.00e+00	650.00
IUUC-Mtr-058332	Medicago truncatula	66.62	0.00e+00	857.00
IUUC-Mac-065438	Musa acuminata	57.03	0.00e+00	676.00
IUUC-Oba-075184	Oryza barthii	57.07	0.00e+00	665.00
IUUC-Obr-076590	Oryza brachyantha	56.32	0.00e+00	660.00
IUUC-Ogl-077386	Oryza glaberrima	57.07	0.00e+00	665.00
IUUC-Ogu-078326	Oryza glumaepatula	57.07	0.00e+00	666.00
IUUC-Oin-079687	Oryza indica	57.07	0.00e+00	664.00
IUUC-Olo-081001	Oryza longistaminata	57.07	0.00e+00	665.00
IUUC-Ome-081417	Oryza meridionalis	56.55	0.00e+00	672.00
IUUC-Oni-082379	Oryza nivara	57.07	0.00e+00	664.00
IUUC-Opu-083774	Oryza punctata	55.93	0.00e+00	664.00
IUUC-Oru-084885	Oryza rufipogon	56.91	0.00e+00	663.00
IUUC-Ppa-095383	Physcomitrella patens	51.13	2.00e-176	612.00
IUUC-Pop-098809	Populus trichocarpa	72.52	0.00e+00	917.00
IUUC-Ppe-102057	Prunus persica	69.95	0.00e+00	771.00
IUUC-Smo-109443	Selaginella moellendorffii	51.68	9.00e-162	563.00
IUUC-Sit-110392	Setaria italica	63.19	0.00e+00	655.00
IUUC-Sly-111594	Solanum lycopersicum	69.38	0.00e+00	888.00
IUUC-Stu-112876	Solanum tuberosum	68.52	0.00e+00	874.00
IUUC-Sbi-113843	Sorghum bicolor	55.21	0.00e+00	638.00
IUUC-Tca-121745	Theobroma cacao	69.44	0.00e+00	875.00
IUUC-Tae-123188	Triticum aestivum	56.84	0.00e+00	654.00
IUUC-Tur-126448	Triticum urartu	60.85	0.00e+00	652.00
IUUC-Vvi-131752	Vitis vinifera	73.46	0.00e+00	884.00
IUUC-Xtr-132376	Xenopus tropicalis	29.18	7.00e-12	66.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence