iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099158

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000352

Gene Name

POPTRDRAFT_905364; POPTR_0016s01560g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0016s01560	POPTR_0016s01560.1	POPTR_0016s01560.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.60e-42	147.1	217	529

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaee.fsgye 88
           +Gl+N+  t ++N ++Q+L+ +++lr+++l   +e+ +     + k +l++ + +l +++w   + k++vsp+e+l+a+ k++++ f+  +
   Q: 217  VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--PENYQ-----HCKSPLVQRYGELTRKIWhaRNFKGQVSPHEFLQAVMKASKKrFRIGQ 300
           6******************************..55554.....45679*************999999**********998888777***** PP
   S: 89   qqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlk......sqikclecdnvssreepfldls 173
           q D  Ef+a+ll++l+++l                         ++ kkn+s+i + Fqg+l+      ++ + ++ +++ +++ pfl l 
   Q: 301  QSDPVEFMAWLLNTLHTNL-------------------------RTLKKNNSIIYECFQGELEvvkeipNKAITEK-KENETSRMPFLMLG 365
           *******************.........................789****************8877754444444.44445677****** PP
   S: 174  lpvp.........gkeetkke......slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksreki 249
           l++p         +      +       l ++L++f  e   e           + + a+ k ++ +lP++Lilh++Rf  ++++ + ek+
   Q: 366  LDLPppplfkdvmE------KniipqvPLFNILKKFDGESVTE---------VVRPRVARMKYRVIRLPQYLILHMQRF--KKNNFFIEKN 439
           ****5554322221......22333335555555554444443.........44555689999****************..88899***** PP
   S: 250  nkkvefple.Ldlspfctspeekqke..kkkYeLiavvvHsGslssGHYvayvknekgk.WllfdDskVtevkeeevleetgstaYvlfYk 336
            + v+fp + L+l+ f   p  k++e  + kY+Lia +vH G++++G Y ++v+ ++++ W+++ D +V+e+  + v     s+aY+ +Y+
   Q: 440  PTLVNFPVKnLELKDFIPLPMPKENErlRSKYDLIADIVHDGKPNEGFYRVFVQRKSEElWYEMQDLHVSETLPQMVAL---SEAYLQIYE 527
           *******999****998886666665569*************************988889*******************...********9 PP
   S: 337  rr 338
           ++
   Q: 528  QQ 529
           85 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGTEESGGVS KRQRLDEQSS ASGIENPLVP YNDVDDEEED FERGRTANGG GRVEENRGQV 60
VAAENGEEEE EEEEEDLYGE ENSLEKRKSQ FEPREDCPYL DTVNRQVLDF DFEKFCSVSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCGTTTTGT CTCGGCTTAG CAAAACACTC TTCAAGCAGC AGCAAGCAGC AGTCCAGTCT 60
CGAAACTGGA AACATTTTGG GTTCTTTTCA AGATCACCAA ATCAAAGGTA AGTTGTTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR033809--USP39
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

SMART

SM00290--ZnF_UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0000245--P:spliceosomal complex assembly

KEGG

pop:POPTR_0016s01560g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005683	Arabidopsis lyrata	80.94	0.00e+00	695.00
IUUC-Ath-007661	Arabidopsis thaliana	80.94	0.00e+00	709.00
IUUC-Afl-008735	Aspergillus flavus	54.29	5.00e-44	171.00
IUUC-Ang-009661	Aspergillus niger	41.87	5.00e-95	341.00
IUUC-Bol-016317	Brassica oleracea	80.27	0.00e+00	694.00
IUUC-Bra-017190	Brassica rapa	80.27	0.00e+00	696.00
IUUC-Cel-018491	Caenorhabditis elegans	46.64	2.00e-116	412.00
IUUC-Cne-026802	Cryptococcus neoformans	44.05	2.00e-99	355.00
IUUC-Mtr-058644	Medicago truncatula	86.85	0.00e+00	774.00
IUUC-Olu-087614	Ostreococcus lucimarinus	48.76	1.00e-108	385.00
IUUC-Sce-106368	Saccharomyces cerevisiae	29.27	1.00e-43	170.00
IUUC-Spo-108018	Schizosaccharomyces pombe	43.72	4.00e-100	357.00
IUUC-Smo-108892	Selaginella moellendorffii	81.53	0.00e+00	726.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence