iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002776

Ensembl Protein ID

ERN12793

UniProt Accession

W1PX63; W1PX63_AMBTC

Genbank Protein ID

ERN12793.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

KI392605

Gene Name

AMTR_s00043p00215340

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00043p00215340	ERN12793	ERN12793

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-30	105.9	7	79

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl.teedlvPnltlrrliqawceens 73
           +p++f+CpIsle+M+dPv+lpsG+t+dr+sI++wl+sg++tcP+t+ pl  + +l+Pnl+lr+li  w ++++
   Q: 7    PPDDFKCPISLEIMSDPVILPSGHTFDRASIQRWLDSGHRTCPITQLPLpPHPTLIPNLSLRSLICLWSKSHN 79
           79***********************************************777889*************99986 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MEAQLQPPDD FKCPISLEIM SDPVILPSGH TFDRASIQRW LDSGHRTCPI TQLPLPPHPT 60
LIPNLSLRSL ICLWSKSHNH PLPQPLPYSS TTTPSIHSLI LSLSSPSSTL PHKLHSLHHL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGCCC AACTCCAGCC CCCTGACGAT TTCAAATGCC CAATTTCGCT GGAGATAATG 60
TCGGACCCCG TCATCCTGCC GTCCGGCCAC ACCTTTGACC GCGCCTCCAT CCAGCGGTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

atr:18441019

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006175	Arabidopsis lyrata	47.53	2.00e-67	248.00
IUUC-Ath-006926	Arabidopsis thaliana	47.81	1.00e-67	248.00
IUUC-Bol-015331	Brassica oleracea	47.95	4.00e-66	243.00
IUUC-Bra-017717	Brassica rapa	46.05	1.00e-55	209.00
IUUC-Gma-043375	Glycine max	51.49	8.00e-32	129.00
IUUC-Mtr-058590	Medicago truncatula	47.85	4.00e-69	253.00
IUUC-Pop-100028	Populus trichocarpa	49.44	1.00e-74	272.00
IUUC-Ppe-101638	Prunus persica	51.77	4.00e-89	320.00
IUUC-Sly-111598	Solanum lycopersicum	49.33	5.00e-73	266.00
IUUC-Stu-112509	Solanum tuberosum	49.73	6.00e-74	269.00
IUUC-Tca-121293	Theobroma cacao	53.83	2.00e-85	308.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence