iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114284

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G107300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g009580	Sb01g009580.1	Sb01g009580.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-54	179.4	153	191
UBD/Beta-Prp	1.40e-82	278.1	19	317

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           H+++vt+++f  + +++vsGs+Dg ++vWD +tg+++k+
   Q: 153  HSEPVTAVDFdREgDMIVSGSYDGLCRVWDSTTGHCVKT 191
           9*********9778**********************986 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls...tgkcvhtlkghed 95
            tl+gh+ +v t vkfspd++lla++s+d+ ++vw+ ++ + +++l gh ++v++++fspdg +l+++s+Drt+++wdl        + tl+gh++
   Q: 19   STLEGHRRAVST-VKFSPDGRLLASASADKLLRVWSSSDLSPVAELAGHGEGVSDLSFSPDGRLLASASDDRTVRIWDLAvggGARLIKTLTGHTN 113
           589999999999.*******************************************************************999999********** PP
   S: 96   svlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsn 191
           ++ ++sfsp g++l+sGs d+t+rvw++++g+cl+ +l  h++ v+ v ++ +g+++vsGs+D+ +r+Wd+ tg +++tl  +  ++v   +f++n
   Q: 114  YAFCVSFSPHGNVLASGSFDETVRVWEVRSGKCLR-VLPAHSEPVTAVDFDREGDMIVSGSYDGLCRVWDSTTGHCVKTLIDDESPPVSFAKFSPN 208
           ***********************************.********************************************9999************ PP
   S: 192  gkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs...pnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgs 284
           gk+++++ ld+t++lw++++g+ ++t++gh ++ +++ +     n++++vsgs+D+ +++Wdl+s+ ++++l++h ++vi+v++ ++++n++++g+
   Q: 209  GKFILAATLDSTLRLWNFSAGKFLKTYTGHVNTKYCIPAAfsiTNGKYIVSGSEDKCVYLWDLQSRRIVQKLEGHTDTVIAVSC-HPTENMIASGA 303
           ************************************97766799****************************************.**********9 PP
   S: 285  e..dskvniwklkk 296
              d++v++w +k+
   Q: 304  LdnDKTVKVWVQKE 317
           888*******8876 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAAPAADDAS ASPGYVLRST LEGHRRAVST VKFSPDGRLL ASASADKLLR VWSSSDLSPV 60
AELAGHGEGV SDLSFSPDGR LLASASDDRT VRIWDLAVGG GARLIKTLTG HTNYAFCVSF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCGC CGGCGGCCGA CGATGCCTCG GCATCCCCAG GCTACGTCCT TCGCTCCACA 60
CTTGAGGGGC ACCGCCGCGC CGTCTCAACC GTCAAGTTCT CCCCGGATGG TCGCCTTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0048188--C:Set1C/COMPASS complex
GO:0010228--P:vegetative to reproductive phase transition of meristem

KEGG

sbi:SORBI_01g009580

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000333	Aegilops tauschii	72.87	7.00e-106	375.00
IUUC-Aml-002420	Ailuropoda melanoleuca	62.00	2.00e-118	417.00
IUUC-Atr-002439	Amborella trichopoda	72.04	5.00e-137	479.00
IUUC-Apl-003436	Anas platyrhynchos	56.33	1.00e-106	378.00
IUUC-Aca-004259	Anolis carolinensis	61.67	7.00e-118	416.00
IUUC-Aly-005723	Arabidopsis lyrata	65.37	2.00e-126	444.00
IUUC-Ath-007308	Arabidopsis thaliana	66.34	2.00e-127	447.00
IUUC-Ago-007915	Ashbya gossypii	38.03	4.00e-43	167.00
IUUC-Acl-008045	Aspergillus clavatus	43.13	5.00e-75	274.00
IUUC-Afl-008596	Aspergillus flavus	43.63	1.00e-74	273.00
IUUC-Afu-009074	Aspergillus fumigatus	45.28	2.00e-76	279.00
IUUC-Ani-009318	Aspergillus nidulans	43.00	5.00e-72	264.00
IUUC-Ang-009775	Aspergillus niger	42.90	6.00e-74	271.00
IUUC-Aor-010222	Aspergillus oryzae	43.63	1.00e-74	273.00
IUUC-Ate-010583	Aspergillus terreus	42.90	1.00e-73	269.00
IUUC-Ame-011349	Astyanax mexicanus	62.00	5.00e-118	416.00
IUUC-Bgr-011968	Blumeria graminis	46.96	2.00e-77	281.00
IUUC-Bta-013016	Bos taurus	62.00	3.00e-118	417.00
IUUC-Bci-013948	Botrytis cinerea	45.36	8.00e-72	263.00
IUUC-Bdi-014263	Brachypodium distachyon	90.85	2.00e-167	580.00
IUUC-Bol-015900	Brassica oleracea	62.99	7.00e-120	422.00
IUUC-Bra-017143	Brassica rapa	63.31	7.00e-121	425.00
IUUC-Cel-018355	Caenorhabditis elegans	55.18	5.00e-106	376.00
IUUC-Cja-019936	Callithrix jacchus	62.00	2.00e-118	417.00
IUUC-Cfa-020596	Canis familiaris	62.00	2.00e-118	417.00
IUUC-Cpo-021318	Cavia porcellus	62.00	2.00e-118	417.00
IUUC-Cre-022935	Chlamydomonas reinhardtii	43.11	7.00e-75	273.00
IUUC-Csa-023053	Chlorocebus sabaeus	62.00	2.00e-118	417.00
IUUC-Cho-024642	Choloepus hoffmanni	60.54	1.00e-107	381.00
IUUC-Cin-025495	Ciona intestinalis	60.67	4.00e-117	413.00
IUUC-Csv-025988	Ciona savignyi	60.88	5.00e-115	406.00
IUUC-Cgl-026771	Colletotrichum gloeosporioides	34.64	4.00e-43	169.00
IUUC-Cne-027025	Cryptococcus neoformans	33.93	2.00e-58	218.00
IUUC-Cme-027119	Cyanidioschyzon merolae	52.15	1.00e-96	345.00
IUUC-Dre-027521	Danio rerio	62.00	3.00e-118	417.00
IUUC-Dno-029739	Dasypus novemcinctus	62.00	3.00e-118	417.00
IUUC-Dor-030966	Dipodomys ordii	62.00	4.00e-118	416.00
IUUC-Dse-031189	Dothistroma septosporum	44.62	1.00e-74	273.00
IUUC-Dme-031613	Drosophila melanogaster	62.21	2.00e-118	417.00
IUUC-Ete-033098	Echinops telfairi	59.14	3.00e-109	387.00
IUUC-Eca-033790	Equus caballus	62.00	2.00e-118	417.00
IUUC-Eeu-034805	Erinaceus europaeus	59.00	4.00e-106	377.00
IUUC-Fca-035901	Felis catus	62.00	2.00e-118	417.00
IUUC-Fal-037413	Ficedula albicollis	62.00	2.00e-118	417.00
IUUC-Fox-037876	Fusarium oxysporum	46.38	5.00e-57	213.00
IUUC-Gmo-039314	Gadus morhua	61.67	2.00e-117	414.00
IUUC-Ggr-040071	Gaeumannomyces graminis	40.21	2.00e-58	219.00
IUUC-Gga-040789	Gallus gallus	62.00	2.00e-118	417.00
IUUC-Gac-042634	Gasterosteus aculeatus	62.00	1.00e-117	415.00
IUUC-Gma-043987	Glycine max	68.79	3.00e-135	473.00
IUUC-Ggo-044443	Gorilla gorilla	62.00	2.00e-118	417.00
IUUC-Hsa-046290	Homo sapiens	62.00	2.00e-118	417.00
IUUC-Hvu-047077	Hordeum vulgare	88.94	4.00e-109	385.00
IUUC-Itr-048954	Ictidomys tridecemlineatus	62.00	2.00e-118	417.00
IUUC-Kpa-049404	Komagataella pastoris	45.19	3.00e-60	224.00
IUUC-Lch-049539	Latimeria chalumnae	62.00	2.00e-118	417.00
IUUC-Lpe-051082	Leersia perrieri	88.24	9.00e-165	571.00
IUUC-Loc-051743	Lepisosteus oculatus	62.00	5.00e-118	416.00
IUUC-Lma-053188	Leptosphaeria maculans	44.55	2.00e-77	282.00
IUUC-Laf-054432	Loxodonta africana	58.86	7.00e-115	405.00
IUUC-Mcc-055603	Macaca mulatta	62.00	2.00e-118	417.00
IUUC-Meu-056440	Macropus eugenii	59.67	2.00e-104	371.00
IUUC-Mor-056965	Magnaporthe oryzae	36.42	3.00e-63	235.00
IUUC-Mpo-057333	Magnaporthe poae	40.43	1.00e-57	217.00
IUUC-Mtr-057951	Medicago truncatula	68.69	3.00e-132	463.00
IUUC-Mla-058896	Melampsora laricipopulina	39.73	5.00e-67	247.00
IUUC-Mga-060046	Meleagris gallopavo	61.67	5.00e-118	416.00
IUUC-Mvi-060453	Microbotryum violaceum	48.28	5.00e-88	317.00
IUUC-Mmr-061020	Microcebus murinus	57.78	2.00e-110	390.00
IUUC-Mdo-062204	Monodelphis domestica	62.00	3.00e-117	413.00
IUUC-Mmu-063917	Mus musculus	62.00	2.00e-118	417.00
IUUC-Mac-065310	Musa acuminata	77.05	1.00e-143	501.00
IUUC-Mpu-066072	Mustela putorius furo	62.00	2.00e-118	417.00
IUUC-Mlu-068209	Myotis lucifugus	62.00	2.00e-118	417.00
IUUC-Nfi-068538	Neosartorya fischeri	44.63	1.00e-75	276.00
IUUC-Ncr-068651	Neurospora crassa	37.57	2.00e-63	236.00
IUUC-Nle-069383	Nomascus leucogenys	59.47	1.00e-106	378.00
IUUC-Opr-070937	Ochotona princeps	58.64	3.00e-102	363.00
IUUC-Ont-071458	Oreochromis niloticus	62.00	4.00e-118	416.00
IUUC-Oan-073597	Ornithorhynchus anatinus	62.00	3.00e-118	417.00
IUUC-Ocu-074180	Oryctolagus cuniculus	32.06	3.00e-44	171.00
IUUC-Oba-075082	Oryza barthii	76.95	5.00e-131	459.00
IUUC-Obr-076318	Oryza brachyantha	90.70	1.00e-120	424.00
IUUC-Ogl-077251	Oryza glaberrima	87.86	4.00e-163	566.00
IUUC-Ogu-078882	Oryza glumaepatula	71.86	4.00e-146	509.00
IUUC-Oin-079601	Oryza indica	79.48	3.00e-158	550.00
IUUC-Olo-080976	Oryza longistaminata	89.66	1.00e-143	501.00
IUUC-Ome-081430	Oryza meridionalis	88.10	2.00e-163	566.00
IUUC-Oni-082182	Oryza nivara	71.27	1.00e-145	508.00
IUUC-Opu-083880	Oryza punctata	87.46	1.00e-161	560.00
IUUC-Osa-085706	Oryza sativa	87.86	4.00e-163	566.00
IUUC-Ola-087134	Oryzias latipes	62.00	7.00e-118	416.00
IUUC-Oga-088672	Otolemur garnettii	62.00	2.00e-118	417.00
IUUC-Oar-089860	Ovis aries	59.53	1.00e-106	378.00
IUUC-Ptr-091513	Pan troglodytes	62.00	2.00e-118	417.00
IUUC-Pan-092046	Papio anubis	62.00	2.00e-118	417.00
IUUC-Psi-093192	Pelodiscus sinensis	62.00	2.00e-118	417.00
IUUC-Pma-094425	Petromyzon marinus	35.00	5.00e-42	164.00
IUUC-Pno-094881	Phaeosphaeria nodorum	47.16	7.00e-82	296.00
IUUC-Ppa-095367	Physcomitrella patens	64.14	6.00e-123	432.00
IUUC-Pfo-097434	Poecilia formosa	62.00	7.00e-118	416.00
IUUC-Pab-098758	Pongo abelii	59.80	2.00e-107	380.00
IUUC-Pop-099778	Populus trichocarpa	69.58	7.00e-131	459.00
IUUC-Pca-100281	Procavia capensis	47.41	1.00e-70	258.00
IUUC-Ppe-101341	Prunus persica	65.18	9.00e-125	438.00
IUUC-Pva-103020	Pteropus vampyrus	61.67	4.00e-118	416.00
IUUC-Pgr-103589	Puccinia graminis	38.11	4.00e-68	251.00
IUUC-Ptt-103745	Puccinia triticina	35.71	1.00e-35	143.00
IUUC-Pte-104153	Pyrenophora teres	48.23	6.00e-84	303.00
IUUC-Pyt-104712	Pyrenophora triticirepentis	48.11	1.00e-69	255.00
IUUC-Rno-105858	Rattus norvegicus	62.00	2.00e-118	417.00
IUUC-Sce-106243	Saccharomyces cerevisiae	31.46	7.00e-39	153.00
IUUC-Sha-107101	Sarcophilus harrisii	62.00	1.00e-118	418.00
IUUC-Sja-107858	Schizosaccharomyces japonicus	43.52	2.00e-57	215.00
IUUC-Spo-108117	Schizosaccharomyces pombe	40.09	2.00e-55	208.00
IUUC-Smo-109155	Selaginella moellendorffii	66.45	2.00e-126	444.00
IUUC-Sit-110688	Setaria italica	96.39	9.00e-176	608.00
IUUC-Sly-110891	Solanum lycopersicum	70.43	8.00e-133	465.00
IUUC-Stu-112365	Solanum tuberosum	70.76	5.00e-133	466.00
IUUC-Sar-113309	Sorex araneus	32.06	4.00e-44	171.00
IUUC-Sre-115180	Sporisorium reilianum	41.00	1.00e-58	218.00
IUUC-Ssc-116204	Sus scrofa	62.00	2.00e-118	417.00
IUUC-Tgu-117172	Taeniopygia guttata	62.00	2.00e-118	417.00
IUUC-Tru-118320	Takifugu rubripes	62.33	1.00e-118	418.00
IUUC-Tsy-119493	Tarsius syrichta	32.06	1.00e-42	166.00
IUUC-Tni-120660	Tetraodon nigroviridis	57.29	1.00e-67	248.00
IUUC-Tca-121051	Theobroma cacao	68.71	4.00e-133	466.00
IUUC-Tre-122237	Trichoderma reesei	43.97	3.00e-76	278.00
IUUC-Tvi-122635	Trichoderma virens	43.51	2.00e-75	275.00
IUUC-Tae-125819	Triticum aestivum	90.52	2.00e-167	580.00
IUUC-Tur-126217	Triticum urartu	76.79	1.00e-104	371.00
IUUC-Tme-127061	Tuber melanosporum	50.49	2.00e-91	327.00
IUUC-Tbe-127488	Tupaia belangeri	59.67	1.00e-107	382.00
IUUC-Ttr-129309	Tursiops truncatus	57.67	4.00e-108	383.00
IUUC-Uma-129585	Ustilago maydis	40.66	1.00e-67	249.00
IUUC-Vda-129907	Verticillium dahliae	42.41	1.00e-70	260.00
IUUC-Vpa-130384	Vicugna pacos	60.00	3.00e-106	377.00
IUUC-Vvi-131269	Vitis vinifera	70.16	1.00e-128	451.00
IUUC-Xtr-131945	Xenopus tropicalis	61.33	2.00e-117	414.00
IUUC-Xma-132997	Xiphophorus maculatus	62.00	7.00e-118	416.00
IUUC-Yli-134418	Yarrowia lipolytica	43.52	2.00e-74	271.00
IUUC-Zma-135765	Zea mays	98.04	1.00e-178	617.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence