iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099671

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_423604; POPTR_0001s02360g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s02360	POPTR_0001s02360.1	POPTR_0001s02360.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-06	30.1	144	186

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  ++  ++lp C H+fh  C+  w       + + +CPlCr
   Q: 144  CSVCLSEFqeDESIRLLPkCSHAFHVPCIDTW------LRSHSNCPLCR 186
           ********7655599999**************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MASLGTPKTR IPYVNNKDCS QGFCSLYCPQ WCYIIFPPPP PLEFLDDNSS PKISPLVIAI 60
IGILLSAFLL VIYYTIISKY CGNNDPARRR DQNHGQNEEF EGDHNPSLHE PWHAATTGLD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAGAAGAG AAAGAAAAGA AAGAATTCTA ATCAACACTC TTTACTTTGC TTTCCATGTA 60
AGCCCTTCCC CTTCCAAATT CCAGGCTTCT CCTCTGTGGT CTCTTAAAAT CGTATTACTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0001s02360g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002971	Amborella trichopoda	48.24	3.00e-80	291.00
IUUC-Bdi-014591	Brachypodium distachyon	40.00	8.00e-52	197.00
IUUC-Gma-042838	Glycine max	60.17	3.00e-98	351.00
IUUC-Mtr-058411	Medicago truncatula	55.25	6.00e-95	340.00
IUUC-Mac-065580	Musa acuminata	47.45	6.00e-83	300.00
IUUC-Ppe-101720	Prunus persica	56.53	6.00e-92	330.00
IUUC-Tca-121189	Theobroma cacao	68.98	5.00e-131	459.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence