iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017972

Ensembl Protein ID

Bra004373.1-P

UniProt Accession

M4CJI9; M4CJI9_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra004373	Bra004373.1	Bra004373.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.00e-06	29.2	47	102

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkw...pglknssskefr......CPlCr 46
           C+iC+e+f   ++ p+vl CgH+ +++C+ ++   +   ++ss+ ++      CP+C+
   Q: 47   CPICFESFnivENVPYVLWCGHTLCQNCVFALqpaV--LRLSSQDIKvpffvsCPWCQ 102
           ********999999**************84444331..222333332444445****7 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MWSFASNVIG SIGLKKDPPQ PSSDNDDEVS NVSRDDEEEE EEQGLDCPIC FESFNIVENV 60
PYVLWCGHTL CQNCVFALQP AVLRLSSQDI KVPFFVSCPW CQLLSLRVVY NGVLKFPKKN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTGGAGCT TTGCGTCGAA TGTAATCGGC AGCATAGGTC TAAAGAAAGA TCCACCTCAA 60
CCCTCCTCAG ACAACGACGA CGAGGTCTCA AATGTCAGCA GAGACGACGA AGAAGAAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13445--zf-RING_UBOX

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006067	Arabidopsis lyrata	72.53	6.00e-91	326.00
IUUC-Ath-007395	Arabidopsis thaliana	68.59	4.00e-88	317.00
IUUC-Bol-016461	Brassica oleracea	86.56	3.00e-91	327.00
IUUC-Gma-044330	Glycine max	55.51	3.00e-69	254.00
IUUC-Loc-051895	Lepisosteus oculatus	43.10	3.00e-07	47.40
IUUC-Mtr-058453	Medicago truncatula	54.48	3.00e-60	224.00
IUUC-Ppe-101923	Prunus persica	54.47	5.00e-58	216.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence