iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111580

Ensembl Protein ID

Solyc06g051090.1.1

UniProt Accession

K4C5Q2; K4C5Q2_SOLLC

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc06g051090.1	Solyc06g051090.1.1	Solyc06g051090.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.10e-31	107.3	160	233

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +vp+e++CpIsl+l rdPv+++sG+tydr+sI++w++sg++tcP  +q+l +  l+Pn++l++liq+wc++n++
   Q: 160  DVPDELRCPISLDLIRDPVIVASGHTYDRNSIAQWINSGHHTCPRSGQKLIHMALIPNYALKSLIQQWCQDNNI 233
           69********************************************************************9976 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MDNALDILPL RMLNVTVDTK EQVELLHKQA KRADLFIDPR DIQKRKEILH LMATNCDRKS 60
KNKGLIDFET VKQSLNSIGL RSSLDYEEEI AKLKTQAEKQ AGTGGLIAVS NINSLISLMS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACAACG CACTTGACAT TTTACCTCTG AGGATGCTTA ATGTGACTGT TGACACCAAG 60
GAGCAAGTAG AGCTACTTCA CAAGCAGGCG AAAAGGGCTG ATTTGTTCAT TGATCCCCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002723	Amborella trichopoda	49.82	8.00e-125	440.00
IUUC-Gma-042912	Glycine max	60.14	3.00e-145	507.00
IUUC-Mtr-058278	Medicago truncatula	64.24	0.00e+00	662.00
IUUC-Olu-087884	Ostreococcus lucimarinus	48.53	2.00e-22	95.50
IUUC-Pop-098818	Populus trichocarpa	69.11	0.00e+00	700.00
IUUC-Ppe-101201	Prunus persica	70.32	0.00e+00	736.00
IUUC-Stu-112508	Solanum tuberosum	93.24	0.00e+00	947.00
IUUC-Tca-121845	Theobroma cacao	70.14	0.00e+00	785.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence