iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014290

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000880

Gene Name

LOC100840591; BRADI_1g71460

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G71460	BRADI1G71460.1	BRADI1G71460.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	5.70e-06	27.0	14	77

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 87   apaptptpeegpd..aglldrlp..eeilveilklldkeellraarvcrrwqelasqkalwktv 146
           a a +p pee     ag   +++   +il eil++ld+++l +aa vcr w  +++++a+w+++
   Q: 14   AEAVAPEPEEKRVqlAGAAYNINdnADILSEILSRLDGRSLAAAAGVCRLWAAVSRRDAVWEAL 77
           4455555555544114444445422799*********************************986 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MGSRQDREKG GDEAEAVAPE PEEKRVQLAG AAYNINDNAD ILSEILSRLD GRSLAAAAGV 60
CRLWAAVSRR DAVWEALCLR HVGPTARSGL GATRAVVGAL GGYRRLYRLC LGPALDRLGL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGTCAC GGCAGGACAG GGAGAAGGGA GGAGACGAAG CCGAGGCCGT GGCGCCGGAG 60
CCGGAGGAGA AGCGCGTGCA GCTGGCGGGC GCCGCCTACA ACATCAACGA CAACGCCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

Pfam

PF12937--F-box-like

Gene Ontology

GO:0019005--C:SCF ubiquitin ligase complex
GO:0000151--C:ubiquitin ligase complex
GO:0009740--P:gibberellic acid mediated signaling pathway
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0009937--P:regulation of gibberellic acid mediated signaling pathway
GO:0048831--P:regulation of shoot system development

KEGG

bdi:100840591

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005539	Arabidopsis lyrata	46.43	6.00e-24	102.00
IUUC-Ath-007127	Arabidopsis thaliana	46.43	5.00e-24	102.00
IUUC-Bol-015233	Brassica oleracea	49.35	3.00e-23	100.00
IUUC-Bra-017984	Brassica rapa	50.00	2.00e-24	103.00
IUUC-Gac-041831	Gasterosteus aculeatus	37.10	2.00e-04	37.40
IUUC-Gma-043632	Glycine max	51.35	2.00e-26	110.00
IUUC-Lpe-050816	Leersia perrieri	68.75	5.00e-23	99.80
IUUC-Mtr-057946	Medicago truncatula	47.95	2.00e-22	97.40
IUUC-Ogl-077474	Oryza glaberrima	76.32	2.00e-21	94.70
IUUC-Ogu-079029	Oryza glumaepatula	76.32	2.00e-21	94.70
IUUC-Oin-080121	Oryza indica	76.32	2.00e-21	94.70
IUUC-Ome-081968	Oryza meridionalis	84.91	2.00e-12	62.40
IUUC-Oni-082552	Oryza nivara	76.32	2.00e-21	94.70
IUUC-Opu-083746	Oryza punctata	74.07	5.00e-22	96.30
IUUC-Oru-084658	Oryza rufipogon	76.32	2.00e-21	94.70
IUUC-Osa-086295	Oryza sativa	76.32	2.00e-21	94.70
IUUC-Ola-086930	Oryzias latipes	33.33	3.00e-03	35.40
IUUC-Pop-099566	Populus trichocarpa	48.00	4.00e-21	92.80
IUUC-Ppe-102106	Prunus persica	50.00	9.00e-21	91.70
IUUC-Sly-111364	Solanum lycopersicum	43.71	1.00e-24	105.00
IUUC-Stu-112502	Solanum tuberosum	44.31	1.00e-25	107.00
IUUC-Sbi-114231	Sorghum bicolor	93.88	1.00e-12	65.50
IUUC-Tni-120176	Tetraodon nigroviridis	40.00	4.00e-03	35.40
IUUC-Tae-124891	Triticum aestivum	68.60	2.00e-27	114.00
IUUC-Vvi-130926	Vitis vinifera	48.41	8.00e-24	102.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence