iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000931

Ensembl Protein ID

EMT23628

UniProt Accession

M8BP70; M8BP70_AEGTA

Genbank Protein ID

EMT23628.1

Protein Name

RING-H2 finger protein ATL1M

Genbank Nucleotide ID

KD519563

Gene Name

F775_14296

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_14296	EMT23628	EMT23628

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.10e-06	28.4	66	108

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cle f   ++  +vlp C H fha+C+    g+    +k+ +CP+Cr
   Q: 66   CAVCLEAFmagDR-CMVLPrCEHGFHAECV----GSG--LRKSRLCPICR 108
           ********77655.555666*********5....555..9*********8 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MVLSAVLLAA GITLMLVVHI LVVLWVLRRG MTARVAEHAE EDAGLTAEEL GVLPCHDFKE 60
GGAGECAVCL EAFMAGDRCM VLPRCEHGFH AECVGSGLRK SRLCPICRAE VAGAVAAEVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTCCTCT CGGCCGTCCT GCTCGCGGCA GGCATCACGC TGATGCTCGT CGTGCACATC 60
CTCGTGGTCC TCTGGGTGCT GAGGCGGGGC ATGACGGCCC GCGTCGCCGA GCACGCGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0472--Membrane
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

ats:F775_14296

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002505	Amborella trichopoda	48.28	8.00e-17	79.00
IUUC-Bdi-014002	Brachypodium distachyon	50.00	3.00e-22	96.70
IUUC-Gma-043953	Glycine max	41.38	2.00e-15	74.30
IUUC-Hvu-047516	Hordeum vulgare	54.55	6.00e-28	115.00
IUUC-Lpe-050695	Leersia perrieri	61.82	1.00e-28	119.00
IUUC-Mtr-058799	Medicago truncatula	39.81	8.00e-17	79.00
IUUC-Mac-064764	Musa acuminata	44.94	3.00e-17	80.50
IUUC-Oba-075253	Oryza barthii	72.60	1.00e-24	105.00
IUUC-Obr-076102	Oryza brachyantha	65.59	1.00e-25	108.00
IUUC-Ogl-077645	Oryza glaberrima	72.22	1.00e-23	101.00
IUUC-Ogu-078833	Oryza glumaepatula	62.77	7.00e-25	107.00
IUUC-Oin-079853	Oryza indica	72.22	1.00e-23	101.00
IUUC-Ome-081232	Oryza meridionalis	69.23	2.00e-21	94.00
IUUC-Oni-082095	Oryza nivara	72.22	5.00e-23	100.00
IUUC-Opu-083323	Oryza punctata	70.77	9.00e-24	102.00
IUUC-Oru-085007	Oryza rufipogon	63.83	3.00e-25	107.00
IUUC-Osa-085825	Oryza sativa	72.22	7.00e-24	102.00
IUUC-Ppe-102044	Prunus persica	39.47	3.00e-21	93.20
IUUC-Sit-110293	Setaria italica	53.04	8.00e-27	111.00
IUUC-Sly-111193	Solanum lycopersicum	43.02	1.00e-16	78.60
IUUC-Stu-112590	Solanum tuberosum	43.02	5.00e-16	76.30
IUUC-Sbi-114425	Sorghum bicolor	59.15	8.00e-16	75.50
IUUC-Tca-121009	Theobroma cacao	35.96	1.00e-19	90.50
IUUC-Tae-123943	Triticum aestivum	99.07	4.00e-47	179.00
IUUC-Tur-126037	Triticum urartu	58.72	2.00e-28	118.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence