iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Cel-018342

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BX284606

Gene Name

CELE_F08G12.5; F08G12.5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
WBGene00008588	F08G12.5	F08G12.5

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	15530417

Classification

Family	E-value	Score	Start	End
E3 activity/RING/RING	1.30e-07	32.3	40	91

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw......pglknssskefrCPlCr 46
           Ca+Cl+ f+  p +l CgH f++ C++ +      ++     +++f+CP+Cr
   Q: 40   CAVCLNIFQGIPQTLTCGHSFCHRCIEEVahsevmNDTREPNRNSFHCPICR 91
           ********888***************99999999*888888**********8 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MYGFFRRFIP KDDKKADKKR VLKSLDEADV CVVDVETLRC AVCLNIFQGI PQTLTCGHSF 60
CHRCIEEVAH SEVMNDTREP NRNSFHCPIC RKRVSMSKVI QNYTLKNVLD SINELSREEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTATGGAT TTTTTCGCAG GTTTATTCCA AAGGATGATA AGAAAGCGGA TAAAAAAGTG 60
AGTTTTACAT CAATTACAAT TTTCAAAATT GAATATTTCT GAAGAAAAAA AAACACTTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13445--zf-RING_UBOX

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

cel:CELE_F08G12.5

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005401	Arabidopsis lyrata	33.33	1.00e-06	47.00
IUUC-Ani-009473	Aspergillus nidulans	35.56	3.00e-08	52.40
IUUC-Ate-010489	Aspergillus terreus	29.17	5.00e-08	51.60
IUUC-Ame-011625	Astyanax mexicanus	35.14	4.00e-11	61.20
IUUC-Bta-012800	Bos taurus	27.35	7.00e-10	57.40
IUUC-Bdi-014581	Brachypodium distachyon	29.79	7.00e-07	47.40
IUUC-Bol-015235	Brassica oleracea	30.21	8.00e-07	47.80
IUUC-Dre-027509	Danio rerio	33.88	1.00e-11	63.20
IUUC-Dor-030703	Dipodomys ordii	27.10	1.00e-09	56.60
IUUC-Fca-036349	Felis catus	36.05	2.00e-10	59.30
IUUC-Gmo-039595	Gadus morhua	31.78	5.00e-11	60.80
IUUC-Gac-041526	Gasterosteus aculeatus	33.33	8.00e-07	47.00
IUUC-Lch-050146	Latimeria chalumnae	29.37	9.00e-11	60.50
IUUC-Mtr-058792	Medicago truncatula	29.47	2.00e-06	45.40
IUUC-Mvi-060294	Microbotryum violaceum	28.89	4.00e-05	41.20
IUUC-Mdo-062283	Monodelphis domestica	32.22	4.00e-05	42.00
IUUC-Opr-070792	Ochotona princeps	32.58	6.00e-10	57.00
IUUC-Ont-071304	Oreochromis niloticus	31.53	1.00e-08	53.10
IUUC-Obr-076345	Oryza brachyantha	28.57	3.00e-06	45.40
IUUC-Ogl-077562	Oryza glaberrima	29.79	6.00e-07	47.80
IUUC-Oin-080164	Oryza indica	30.85	1.00e-07	48.50
IUUC-Opu-083277	Oryza punctata	30.85	4.00e-07	48.10
IUUC-Oru-084583	Oryza rufipogon	31.52	7.00e-06	43.90
IUUC-Osa-086171	Oryza sativa	29.79	5.00e-07	47.80
IUUC-Ola-086686	Oryzias latipes	33.96	6.00e-10	57.80
IUUC-Olu-087613	Ostreococcus lucimarinus	36.99	5.00e-06	45.10
IUUC-Oar-089940	Ovis aries	27.45	9.00e-09	53.90
IUUC-Psi-093475	Pelodiscus sinensis	39.08	4.00e-10	56.20
IUUC-Pgr-103338	Puccinia graminis	37.31	1.00e-05	42.40
IUUC-Ptt-103920	Puccinia triticina	34.33	5.00e-05	40.00
IUUC-Sha-107384	Sarcophilus harrisii	27.91	3.00e-07	48.90
IUUC-Sit-110105	Setaria italica	35.48	1.00e-05	42.70
IUUC-Ssc-115920	Sus scrofa	29.41	2.00e-08	52.40
IUUC-Ttr-128284	Tursiops truncatus	26.47	3.00e-08	51.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence