iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000126

Ensembl Protein ID

EMT27109

UniProt Accession

M8BYQ5; M8BYQ5_AEGTA

Genbank Protein ID

EMT27109.1

Protein Name

Putative DNA repair protein RAD23

Genbank Nucleotide ID

KD511843

Gene Name

F775_31306

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_31306	EMT27109	EMT27109

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.60e-22	79.7	162	203
ULD/UDP/UBQ/UBQ_PIM	4.70e-22	78.5	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMG...FdreealqaLraannnleaAveyLldg 41
           +e+ ++q+ +MG   ++r+ +++aLraa+nn+e+A++yL++g
   Q: 162  LEQTVQQILDMGggtWERDMVVRALRAAYNNPERAIDYLYSG 203
           699************************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           mkl+vktlkg+ fe+e++++++v e+K  i++ +g   +p++q+ +Iy+GkiLkDdttL+++++ ++s+++++++k+k
   Q: 1    MKLNVKTLKGTSFEIEATPESSVGEVKRIIESAQGqnvYPADQLMIIYQGKILKDDTTLEANKVAENSFLVIMLSKPK 78
           99*************************************************************************987 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MKLNVKTLKG TSFEIEATPE SSVGEVKRII ESAQGQNVYP ADQLMIIYQG KILKDDTTLE 60
ANKVAENSFL VIMLSKPKAS SSGASTASKA PASQSQPATP PAPVASAARS PPSQAPVAAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGCTCA ACGTGAAGAC CCTCAAGGGC ACAAGCTTCG AGATCGAGGC GACCCCCGAG 60
TCCTCGGTAC GATCCCTCTC CCCCCTTCCC CTCGTGCGTA TCTCCAATCG CGCGCGATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ats:F775_31306

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007830	Ashbya gossypii	26.39	4.00e-15	75.10
IUUC-Bdi-014718	Brachypodium distachyon	76.07	4.00e-150	523.00
IUUC-Csv-025823	Ciona savignyi	35.12	3.00e-17	81.60
IUUC-Fal-037148	Ficedula albicollis	38.89	1.00e-17	83.60
IUUC-Gga-040544	Gallus gallus	33.33	8.00e-21	94.00
IUUC-Gma-044370	Glycine max	55.58	3.00e-99	354.00
IUUC-Hvu-047788	Hordeum vulgare	82.53	4.00e-84	304.00
IUUC-Lma-053328	Leptosphaeria maculans	39.47	6.00e-08	47.80
IUUC-Mtr-058148	Medicago truncatula	56.16	1.00e-105	375.00
IUUC-Mla-058961	Melampsora laricipopulina	43.41	8.00e-23	100.00
IUUC-Mvi-060220	Microbotryum violaceum	45.45	3.00e-23	102.00
IUUC-Mac-065180	Musa acuminata	60.10	1.00e-106	379.00
IUUC-Opr-070234	Ochotona princeps	43.64	2.00e-08	52.40
IUUC-Oba-075951	Oryza barthii	78.40	1.00e-135	475.00
IUUC-Obr-076631	Oryza brachyantha	75.35	3.00e-128	450.00
IUUC-Ogl-077152	Oryza glaberrima	78.40	1.00e-135	475.00
IUUC-Ogu-078896	Oryza glumaepatula	77.93	1.00e-135	475.00
IUUC-Opu-083655	Oryza punctata	77.46	3.00e-130	457.00
IUUC-Ppe-101830	Prunus persica	59.72	5.00e-99	353.00
IUUC-Spo-108298	Schizosaccharomyces pombe	30.73	6.00e-38	150.00
IUUC-Sbi-114835	Sorghum bicolor	92.06	1.00e-64	239.00
IUUC-Tgu-116918	Taeniopygia guttata	30.29	2.00e-23	102.00
IUUC-Tae-125842	Triticum aestivum	95.98	4.00e-150	523.00
IUUC-Tur-126101	Triticum urartu	97.41	2.00e-160	557.00
IUUC-Vpa-130357	Vicugna pacos	41.18	6.00e-12	64.30
IUUC-Xtr-132679	Xenopus tropicalis	38.96	3.00e-12	65.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence