iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014624

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitinyl hydrolase 1

Genbank Nucleotide ID

CM000883

Gene Name

LOC100839956; BRADI_4g34490

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI4G34490	BRADI4G34490.1	BRADI4G34490.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	4.70e-71	240.3	203	653

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaeefsgyeqqDaq 93
           +Gl NlgNtC++N+vLQ+L+++  lr+ +            p+ p+g+l++sl+klf e    ++  +a sp++l+++++++ ++f+gy+ qD++
   Q: 203  KGLPNLGNTCFFNAVLQSLLALDRLRSKMSG----------PDVPTGALTMSLKKLFVETSasNDAGGALSPKSLFSSICSKYPQFRGYQMQDSH 287
           59**************************999..........355789**********99987788888*************************** PP
   S: 94   EflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkke... 185
           E+l+++ld+l++e ++                + +  ee   +  +++++ +F+gql+s++   ec + s+++++fldlslpvp+++  +k+   
   Q: 288  ELLRCFLDGLRTEETE----------------ARKLLEEASSSGVTTIVDSIFGGQLSSTVSSTECTHGSVKYDQFLDLSLPVPSRRPPSKSvss 366
           ************9922................2333456788999***************************************9998888899* PP
   S: 186  ............................................................................................... 185
                                                                                                          
   Q: 367  ppakrtnqsirdrnrnrrygkitttrasptvvenskervetvaecndsqilgselgqvvnekepepsegsescasvsnqelkaasyveddiswld 461
           *********************************************************************************************** PP
   S: 186  ............................................................................................... 185
                                                                                                          
   Q: 462  fvadadetrseildsvcfteagqicdsngathgsydsrddalpkeqvlssehscenivddaaclqpvillpykelcttaneiyessqnpkdvgpa 556
           *********************************************************************************************** PP
   S: 186  ......................................................................slqdcLesftkeeelegenkyycek 210
                                                                                 s++ cL+ +t++e l +   ++ce+
   Q: 557  pdispvtennahplsggngeqddyiglgdmfnepevtseakeettagdidvmawssnsaddevdvsnapvSVEGCLALYTEPELLSE--SWHCEH 649
           *************************************************************************************85..8***** PP
   S: 211  ckkk 214
           c + 
   Q: 650  CSST 653
           *865 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MGKKLKTKTK KVQQQEPLAD AESGDLGLQE ASKSTEEAAV SASDWEQCGH YSRDNPHLDK 60
VLLDFMSSKH VASCEHCRDD GPRKKGGKQQ KKKGGGGAAK TQAKVEKSDM WICLDCGRHF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGAAGA AGCTGAAGAC CAAGACCAAG AAAGTGCAGC AGCAGGAGCC GCTGGCCGAT 60
GCTGAATCCG GCGATCTGGG GTTGCAGGAA GCGAGTAAGT CAACAGAGGA AGCGGCTGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

bdi:100839956

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001931	Ailuropoda melanoleuca	31.40	4.00e-31	129.00
IUUC-Apl-004145	Anas platyrhynchos	30.63	9.00e-32	131.00
IUUC-Aca-004314	Anolis carolinensis	30.30	2.00e-27	117.00
IUUC-Aly-006422	Arabidopsis lyrata	37.28	1.00e-46	181.00
IUUC-Ame-011659	Astyanax mexicanus	33.64	3.00e-26	112.00
IUUC-Bol-015853	Brassica oleracea	34.70	6.00e-45	175.00
IUUC-Cfa-020051	Canis familiaris	31.71	1.00e-30	127.00
IUUC-Cpo-021886	Cavia porcellus	32.73	5.00e-33	135.00
IUUC-Cin-025775	Ciona intestinalis	30.99	2.00e-15	74.30
IUUC-Dno-029409	Dasypus novemcinctus	31.00	6.00e-31	128.00
IUUC-Dor-030443	Dipodomys ordii	37.01	2.00e-23	103.00
IUUC-Ete-032807	Echinops telfairi	37.75	9.00e-24	104.00
IUUC-Eeu-034835	Erinaceus europaeus	36.54	4.00e-23	102.00
IUUC-Fal-037029	Ficedula albicollis	30.49	4.00e-32	132.00
IUUC-Gmo-039480	Gadus morhua	29.31	2.00e-28	120.00
IUUC-Gga-040527	Gallus gallus	28.68	7.00e-29	121.00
IUUC-Gac-042343	Gasterosteus aculeatus	35.61	9.00e-27	114.00
IUUC-Gma-043919	Glycine max	33.77	1.00e-76	281.00
IUUC-Lch-050536	Latimeria chalumnae	29.97	1.00e-29	124.00
IUUC-Loc-051814	Lepisosteus oculatus	35.61	9.00e-28	118.00
IUUC-Mtr-057945	Medicago truncatula	38.51	2.00e-55	210.00
IUUC-Mla-059026	Melampsora laricipopulina	36.36	1.00e-19	90.50
IUUC-Mga-059551	Meleagris gallopavo	27.84	7.00e-30	125.00
IUUC-Mvi-060391	Microbotryum violaceum	36.36	3.00e-20	93.20
IUUC-Mdo-062220	Monodelphis domestica	31.52	8.00e-29	121.00
IUUC-Mmu-063582	Mus musculus	29.64	3.00e-30	126.00
IUUC-Mpu-066339	Mustela putorius furo	32.01	5.00e-31	129.00
IUUC-Ont-071786	Oreochromis niloticus	28.37	8.00e-28	118.00
IUUC-Oan-073656	Ornithorhynchus anatinus	30.42	1.00e-28	120.00
IUUC-Ola-086795	Oryzias latipes	34.50	1.00e-25	110.00
IUUC-Ppa-095825	Physcomitrella patens	43.78	1.00e-39	158.00
IUUC-Pfo-097202	Poecilia formosa	37.37	1.00e-27	117.00
IUUC-Pop-099588	Populus trichocarpa	31.95	3.00e-61	229.00
IUUC-Pca-101069	Procavia capensis	35.90	9.00e-24	104.00
IUUC-Pva-102985	Pteropus vampyrus	30.16	1.00e-23	104.00
IUUC-Sar-113530	Sorex araneus	32.32	1.00e-30	127.00
IUUC-Ssc-116091	Sus scrofa	30.38	7.00e-30	125.00
IUUC-Tgu-117478	Taeniopygia guttata	31.52	1.00e-31	131.00
IUUC-Tru-118640	Takifugu rubripes	35.32	1.00e-26	114.00
IUUC-Tsy-118869	Tarsius syrichta	35.50	4.00e-25	109.00
IUUC-Tni-120015	Tetraodon nigroviridis	37.06	5.00e-28	119.00
IUUC-Tca-121701	Theobroma cacao	31.48	2.00e-71	263.00
IUUC-Tbe-128041	Tupaia belangeri	35.92	4.00e-26	112.00
IUUC-Uma-129375	Ustilago maydis	30.38	2.00e-13	70.50
IUUC-Vpa-130674	Vicugna pacos	31.52	1.00e-30	127.00
IUUC-Xtr-131869	Xenopus tropicalis	29.13	1.00e-27	117.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence