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Tag Content
UUCD2 ID IUUC-Dre-028441
UUCD1 version UUC-DaR-00328
Ensembl Protein ID ENSDARP00000128195.1
UniProt Accession X1WD98; X1WD98_DANRE
Genbank Protein ID ENSDARP00000128195
Protein Name SNF2 histone linker PHD RING helicase
Genbank Nucleotide ID BX296541
Gene Name shprh
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSDARG00000075884.4 ENSDART00000157123.1 ENSDARP00000128195.1
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 62.48 0.00e+00 2057.00 IUUC-Hsa-046172
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Danio rerio
Protein Sequence
(Fasta)
MSSRRKRAPP VRVDEDAKRR LDWNMHEDRK NEGACEDILE SVPAPSDSCL PVPVLEQGFI 60
SSAGTEEEPS EERPSCSTQD SPPDTIELNV MPISVLDQGW NALIGEFNLH PKIPIEVADG 120
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Protein Fasta Sequence


>IUUC-Dre-028441|E3,RING|Danio rerio
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Nucleotide Sequence
(Fasta)
GTCGCTTCCG GTATTTTAAA TATGGCGGAT AAACGCATGA AAATGTCCTG CACGATTTGA 60
AGCTTATAAA AGTTATTTTA TGGCACTTGT TTGCTGCTGA CAAGAACGAG TTCAAAAGGC 120
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Nucleotide Fasta Sequence


>IUUC-Dre-028441|E3,RING|Danio rerio
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR005818--Histone_H1/H5_H15
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR011991--WHTH_DNA-bd_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR018957--Znf_C3HC4_RING-type
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS51504--H15
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS00518--ZF_RING_1
PS50089--ZF_RING_2
Pfam

PF00271--Helicase_C
PF00538--Linker_histone
PF00176--SNF2_N
PF00097--zf-C3HC4
SMART

SM00487--DEXDc
SM00526--H15
SM00490--HELICc
SM00249--PHD
SM00184--RING
Gene Ontology

GO:0000786--C:nucleosome
GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0006334--P:nucleosome assembly
KEGG dre:560526
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Atr-002896 Amborella trichopoda 39.71 2.00e-92 335.00
IUUC-Apl-003428 Anas platyrhynchos 67.31 0.00e+00 2206.00
IUUC-Aca-004510 Anolis carolinensis 80.92 0.00e+00 1630.00
IUUC-Aly-005691 Arabidopsis lyrata 33.17 9.00e-153 535.00
IUUC-Ath-007139 Arabidopsis thaliana 33.00 3.00e-150 526.00
IUUC-Acl-008380 Aspergillus clavatus 33.94 5.00e-29 124.00
IUUC-Afu-008890 Aspergillus fumigatus 35.74 2.00e-37 152.00
IUUC-Ani-009351 Aspergillus nidulans 32.75 3.00e-32 134.00
IUUC-Ang-009583 Aspergillus niger 34.91 1.00e-34 142.00
IUUC-Aor-009893 Aspergillus oryzae 34.17 5.00e-33 137.00
IUUC-Ate-010385 Aspergillus terreus 34.65 2.00e-40 161.00
IUUC-Ame-011882 Astyanax mexicanus 81.31 0.00e+00 2689.00
IUUC-Bgr-012295 Blumeria graminis 32.29 1.00e-39 159.00
IUUC-Bta-012528 Bos taurus 62.30 0.00e+00 2044.00
IUUC-Bci-013701 Botrytis cinerea 33.76 8.00e-36 146.00
IUUC-Bdi-014034 Brachypodium distachyon 37.27 4.00e-76 280.00
IUUC-Bol-015555 Brassica oleracea 34.61 1.00e-154 541.00
IUUC-Bra-016916 Brassica rapa 34.63 1.00e-164 574.00
IUUC-Cja-019391 Callithrix jacchus 62.71 0.00e+00 2045.00
IUUC-Cfa-020732 Canis familiaris 63.04 0.00e+00 2063.00
IUUC-Cpo-021641 Cavia porcellus 62.19 0.00e+00 2013.00
IUUC-Csa-023937 Chlorocebus sabaeus 62.97 0.00e+00 2066.00
IUUC-Cho-024617 Choloepus hoffmanni 57.91 1.00e-89 325.00
IUUC-Cgl-026624 Colletotrichum gloeosporioides 33.02 1.00e-38 155.00
IUUC-Cme-027178 Cyanidioschyzon merolae 34.37 5.00e-130 459.00
IUUC-Dno-029395 Dasypus novemcinctus 60.87 0.00e+00 1981.00
IUUC-Dse-031372 Dothistroma septosporum 33.67 1.00e-38 155.00
IUUC-Dme-031785 Drosophila melanogaster 30.39 9.00e-114 405.00
IUUC-Ete-032502 Echinops telfairi 66.28 0.00e+00 1251.00
IUUC-Eca-033455 Equus caballus 58.72 0.00e+00 1876.00
IUUC-Eeu-034956 Erinaceus europaeus 73.32 0.00e+00 1564.00
IUUC-Fca-035984 Felis catus 58.79 0.00e+00 1554.00
IUUC-Fal-036811 Ficedula albicollis 66.88 0.00e+00 2198.00
IUUC-Fox-038048 Fusarium oxysporum 43.18 3.00e-32 134.00
IUUC-Fso-038224 Fusarium solani 33.78 7.00e-38 153.00
IUUC-Gmo-039126 Gadus morhua 85.22 0.00e+00 1854.00
IUUC-Ggr-040102 Gaeumannomyces graminis 30.52 2.00e-28 122.00
IUUC-Gga-041238 Gallus gallus 67.84 0.00e+00 2229.00
IUUC-Gac-041614 Gasterosteus aculeatus 87.46 0.00e+00 1935.00
IUUC-Gma-043259 Glycine max 41.88 1.00e-83 305.00
IUUC-Ggo-045213 Gorilla gorilla 60.60 0.00e+00 1960.00
IUUC-Hsa-046172 Homo sapiens 62.77 0.00e+00 2049.00
IUUC-Itr-048880 Ictidomys tridecemlineatus 62.10 0.00e+00 2043.00
IUUC-Lch-050648 Latimeria chalumnae 64.34 0.00e+00 1903.00
IUUC-Lpe-050871 Leersia perrieri 37.78 6.00e-77 283.00
IUUC-Loc-051862 Lepisosteus oculatus 73.18 0.00e+00 2419.00
IUUC-Lma-053266 Leptosphaeria maculans 28.66 2.00e-28 121.00
IUUC-Laf-053851 Loxodonta africana 62.32 0.00e+00 2020.00
IUUC-Mcc-055066 Macaca mulatta 62.97 0.00e+00 2061.00
IUUC-Meu-056104 Macropus eugenii 76.13 0.00e+00 695.00
IUUC-Mor-057226 Magnaporthe oryzae 31.76 7.00e-32 133.00
IUUC-Mpo-057528 Magnaporthe poae 33.48 3.00e-27 118.00
IUUC-Mtr-058336 Medicago truncatula 38.33 8.00e-85 309.00
IUUC-Mga-059775 Meleagris gallopavo 67.82 0.00e+00 2216.00
IUUC-Mvi-060213 Microbotryum violaceum 33.10 1.00e-27 120.00
IUUC-Mdo-062943 Monodelphis domestica 68.71 0.00e+00 2232.00
IUUC-Mmu-064115 Mus musculus 62.31 0.00e+00 2047.00
IUUC-Mac-064445 Musa acuminata 37.43 5.00e-87 315.00
IUUC-Mpu-066850 Mustela putorius furo 62.83 0.00e+00 2067.00
IUUC-Mlu-067610 Myotis lucifugus 61.91 0.00e+00 2038.00
IUUC-Nfi-068264 Neosartorya fischeri 35.74 2.00e-37 152.00
IUUC-Ncr-068745 Neurospora crassa 40.61 2.00e-36 148.00
IUUC-Nle-070055 Nomascus leucogenys 62.83 0.00e+00 2048.00
IUUC-Ont-071526 Oreochromis niloticus 75.96 0.00e+00 2515.00
IUUC-Oan-073609 Ornithorhynchus anatinus 81.09 0.00e+00 1327.00
IUUC-Ocu-074042 Oryctolagus cuniculus 62.01 0.00e+00 2040.00
IUUC-Oba-075121 Oryza barthii 37.53 3.00e-75 277.00
IUUC-Obr-076312 Oryza brachyantha 36.57 3.00e-76 281.00
IUUC-Ogl-077560 Oryza glaberrima 37.53 2.00e-75 278.00
IUUC-Ogu-078746 Oryza glumaepatula 36.45 1.00e-76 282.00
IUUC-Oin-080153 Oryza indica 28.77 3.00e-110 394.00
IUUC-Olo-080436 Oryza longistaminata 30.18 3.00e-133 470.00
IUUC-Oni-082845 Oryza nivara 36.45 1.00e-75 279.00
IUUC-Opu-083321 Oryza punctata 30.20 2.00e-133 471.00
IUUC-Oru-084329 Oryza rufipogon 36.45 6.00e-76 280.00
IUUC-Osa-085508 Oryza sativa 40.64 2.00e-32 132.00
IUUC-Olu-087671 Ostreococcus lucimarinus 31.56 1.00e-140 494.00
IUUC-Oar-090005 Ovis aries 62.62 0.00e+00 2058.00
IUUC-Pan-092723 Papio anubis 61.93 0.00e+00 1994.00
IUUC-Psi-093870 Pelodiscus sinensis 68.30 0.00e+00 2221.00
IUUC-Pma-094750 Petromyzon marinus 71.79 2.00e-100 358.00
IUUC-Pno-095005 Phaeosphaeria nodorum 30.49 3.00e-36 148.00
IUUC-Ppa-095619 Physcomitrella patens 31.35 3.00e-86 313.00
IUUC-Pfo-096833 Poecilia formosa 74.88 0.00e+00 2474.00
IUUC-Pab-098544 Pongo abelii 62.89 0.00e+00 2049.00
IUUC-Pop-099540 Populus trichocarpa 41.23 5.00e-94 339.00
IUUC-Ppe-102038 Prunus persica 31.25 4.00e-144 506.00
IUUC-Pte-104081 Pyrenophora teres 30.57 1.00e-34 142.00
IUUC-Pyt-104477 Pyrenophora triticirepentis 31.49 6.00e-37 150.00
IUUC-Rno-104959 Rattus norvegicus 75.88 0.00e+00 1699.00
IUUC-Sha-107078 Sarcophilus harrisii 71.03 0.00e+00 2200.00
IUUC-Sja-107755 Schizosaccharomyces japonicus 32.98 2.00e-39 159.00
IUUC-Spo-108132 Schizosaccharomyces pombe 37.77 4.00e-42 167.00
IUUC-Ssl-108615 Sclerotinia sclerotiorum 28.62 1.00e-31 132.00
IUUC-Smo-108991 Selaginella moellendorffii 36.85 1.00e-172 602.00
IUUC-Sit-110047 Setaria italica 30.12 1.00e-50 196.00
IUUC-Sly-111232 Solanum lycopersicum 29.28 1.00e-91 332.00
IUUC-Sar-113738 Sorex araneus 60.34 0.00e+00 1972.00
IUUC-Sbi-114485 Sorghum bicolor 32.70 7.00e-61 229.00
IUUC-Ssc-116362 Sus scrofa 63.19 0.00e+00 2054.00
IUUC-Tgu-117188 Taeniopygia guttata 66.73 0.00e+00 2182.00
IUUC-Tru-117637 Takifugu rubripes 74.41 0.00e+00 2450.00
IUUC-Tni-119701 Tetraodon nigroviridis 74.19 0.00e+00 2466.00
IUUC-Tca-121831 Theobroma cacao 42.15 2.00e-93 338.00
IUUC-Tre-122005 Trichoderma reesei 29.91 7.00e-26 113.00
IUUC-Tvi-122328 Trichoderma virens 30.18 6.00e-28 120.00
IUUC-Tae-123569 Triticum aestivum 29.16 8.00e-127 449.00
IUUC-Tur-125964 Triticum urartu 28.87 5.00e-125 443.00
IUUC-Tbe-127799 Tupaia belangeri 47.77 0.00e+00 923.00
IUUC-Vda-129795 Verticillium dahliae 29.34 6.00e-25 110.00
IUUC-Vvi-131682 Vitis vinifera 41.12 3.00e-96 347.00
IUUC-Xtr-132232 Xenopus tropicalis 61.91 0.00e+00 1974.00
IUUC-Xma-133291 Xiphophorus maculatus 74.26 0.00e+00 2383.00
IUUC-Yli-134508 Yarrowia lipolytica 29.10 3.00e-26 115.00
IUUC-Zma-135327 Zea mays 35.38 4.00e-75 276.00
Created Date 25-Jun-2017

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