iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-109801

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si025320m.g	Si025320m	Si025320m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.40e-08	33.9	173	215

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +f   d+++ lp C H+fhadC+  w       + +++CPlCr
   Q: 173  CAVCLLEFadGDELRALPlCAHAFHADCIDVW------LRAHASCPLCR 215
           ********6644499*****************......**********8 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MRPRRRPPPP SPAPAPSPAS RSRDVSSPPS PYAALAPGPG PAPEPSAAAV AGGGRRGGAS 60
LSPPLIAMLA VVGAALLVVL YARLVSRVFR AARRRWRRRR LRLLMLPGGG GGGSSPSLRG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGCCCGC GCCGCCGGCC GCCGCCACCG TCCCCGGCGC CTGCTCCCTC CCCCGCGTCG 60
CGCTCTCGCG ACGTCAGCTC GCCGCCTTCC CCCTACGCGG CGTTGGCGCC GGGTCCCGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002525	Amborella trichopoda	42.14	4.00e-36	144.00
IUUC-Aly-005738	Arabidopsis lyrata	34.69	2.00e-25	109.00
IUUC-Ath-006761	Arabidopsis thaliana	35.33	5.00e-27	114.00
IUUC-Bdi-014398	Brachypodium distachyon	62.86	1.00e-58	219.00
IUUC-Bol-015520	Brassica oleracea	38.70	5.00e-33	134.00
IUUC-Bra-017477	Brassica rapa	38.08	4.00e-31	128.00
IUUC-Gma-044120	Glycine max	42.94	3.00e-42	164.00
IUUC-Lpe-051662	Leersia perrieri	68.12	1.00e-59	222.00
IUUC-Mtr-058344	Medicago truncatula	43.23	5.00e-39	154.00
IUUC-Mvi-060211	Microbotryum violaceum	48.84	5.00e-10	60.50
IUUC-Mac-065095	Musa acuminata	40.33	8.00e-30	123.00
IUUC-Ogu-077985	Oryza glumaepatula	66.67	8.00e-62	230.00
IUUC-Oin-079093	Oryza indica	60.06	9.00e-55	206.00
IUUC-Opu-083940	Oryza punctata	62.78	7.00e-61	227.00
IUUC-Oru-084986	Oryza rufipogon	61.19	6.00e-44	170.00
IUUC-Pop-099495	Populus trichocarpa	39.17	2.00e-39	156.00
IUUC-Ppe-101726	Prunus persica	39.60	4.00e-44	171.00
IUUC-Sly-111253	Solanum lycopersicum	41.06	5.00e-37	147.00
IUUC-Stu-112012	Solanum tuberosum	41.46	1.00e-36	146.00
IUUC-Sbi-114003	Sorghum bicolor	66.87	3.00e-67	248.00
IUUC-Tca-120931	Theobroma cacao	38.69	2.00e-43	169.00
IUUC-Tae-123946	Triticum aestivum	67.88	8.00e-70	256.00
IUUC-Vvi-131492	Vitis vinifera	39.74	2.00e-42	166.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence