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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Cel-018171
Ensembl Protein ID D2013.7
UniProt Accession Q18967; EIF3F_CAEEL
Genbank Protein ID CAA87773.1
Protein Name Eukaryotic translation initiation factor 3 subunit F; Eukaryotic translation initiation factor 3 subunit 5
Genbank Nucleotide ID Z47808
Gene Name eif-3.F; D2013.7
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00001229 D2013.7 D2013.7
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNAmiRNAMapRAID2
Protein-protein Interaction
IIDPINAMentha
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
DUB/JAMM 35.19 3.00e-45 179.00 IUUC-Hsa-046860
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Caenorhabditis elegans
Functional Description
(View)

Functional Description


     Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
 Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
Protein Sequence
(Fasta)
MASNLTVNVH PGVYMNVVDT HMRRTKSSAK NTGQEKCMGT LMGYYEKGSI QVTNCFAIPF 60
NESNDDLEID DQFNQQMISA LKKTSPNEQP VGWFLTTSDI TSSCLIYHDY YVRVITEASA 120
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Protein Fasta Sequence


>IUUC-Cel-018171|DUB,JAMM|Caenorhabditis elegans
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Nucleotide Sequence
(Fasta)
GGTTCAGAAA AAAGTCAATA TGGCTTCGAA TTTAACTGTC AATGTCCACC CGGGAGTCTA 60
CATGAATGTT GTCGACACTC ATATGAGACG TACCAAGAGT TCTGCGAAAA ATACAGGACA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Cel-018171|DUB,JAMM|Caenorhabditis elegans
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C
Pfam

PF01398--JAB
PF13012--MitMem_reg
SMART

SM00232--JAB_MPN
Gene Ontology

GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0003743--F:translation initiation factor activity
GO:0031369--F:translation initiation factor binding
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0006412--P:translation
GO:0006413--P:translational initiation
KEGG cel:CELE_D2013.7
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001150 Aegilops tauschii 25.73 4.00e-17 80.90
IUUC-Aml-001527 Ailuropoda melanoleuca 35.19 3.00e-47 181.00
IUUC-Atr-002686 Amborella trichopoda 29.39 2.00e-23 100.00
IUUC-Apl-003977 Anas platyrhynchos 33.47 1.00e-35 141.00
IUUC-Aca-004335 Anolis carolinensis 34.49 9.00e-47 179.00
IUUC-Aly-005945 Arabidopsis lyrata 27.18 1.00e-20 92.00
IUUC-Ath-007045 Arabidopsis thaliana 27.87 5.00e-21 93.60
IUUC-Acl-008365 Aspergillus clavatus 26.62 4.00e-28 117.00
IUUC-Afl-008742 Aspergillus flavus 27.30 3.00e-25 107.00
IUUC-Afu-009030 Aspergillus fumigatus 26.62 5.00e-28 117.00
IUUC-Ani-009212 Aspergillus nidulans 27.30 1.00e-28 119.00
IUUC-Ang-009712 Aspergillus niger 26.96 2.00e-28 119.00
IUUC-Aor-009885 Aspergillus oryzae 27.30 1.00e-28 119.00
IUUC-Ate-010315 Aspergillus terreus 27.30 2.00e-24 105.00
IUUC-Ame-010801 Astyanax mexicanus 39.33 3.00e-17 80.90
IUUC-Bgr-011982 Blumeria graminis 26.19 1.00e-27 115.00
IUUC-Bta-012804 Bos taurus 35.19 6.00e-47 179.00
IUUC-Bci-013891 Botrytis cinerea 27.40 6.00e-24 103.00
IUUC-Bdi-014328 Brachypodium distachyon 25.26 3.00e-17 80.90
IUUC-Bol-015446 Brassica oleracea 28.08 3.00e-22 97.40
IUUC-Bra-016862 Brassica rapa 28.77 5.00e-22 96.70
IUUC-Cja-019335 Callithrix jacchus 35.19 3.00e-47 181.00
IUUC-Cfa-020138 Canis familiaris 34.84 9.00e-47 179.00
IUUC-Cpo-022109 Cavia porcellus 33.22 6.00e-41 159.00
IUUC-Cre-022664 Chlamydomonas reinhardtii 26.56 1.00e-26 111.00
IUUC-Csa-023994 Chlorocebus sabaeus 35.19 4.00e-47 180.00
IUUC-Cho-024351 Choloepus hoffmanni 27.53 2.00e-25 108.00
IUUC-Cin-025801 Ciona intestinalis 30.03 2.00e-36 144.00
IUUC-Csv-025805 Ciona savignyi 29.69 3.00e-36 144.00
IUUC-Cgl-026643 Colletotrichum gloeosporioides 27.40 1.00e-26 112.00
IUUC-Cne-026868 Cryptococcus neoformans 25.52 5.00e-20 90.50
IUUC-Cme-027328 Cyanidioschyzon merolae 23.24 2.00e-09 55.10
IUUC-Dre-028085 Danio rerio 34.84 6.00e-46 176.00
IUUC-Dno-030099 Dasypus novemcinctus 35.19 5.00e-47 180.00
IUUC-Dor-030324 Dipodomys ordii 30.66 1.00e-34 139.00
IUUC-Dse-031314 Dothistroma septosporum 28.33 4.00e-30 123.00
IUUC-Dme-031926 Drosophila melanogaster 33.33 7.00e-40 155.00
IUUC-Ete-032569 Echinops telfairi 32.75 7.00e-40 155.00
IUUC-Eca-033502 Equus caballus 34.49 4.00e-42 164.00
IUUC-Eeu-034883 Erinaceus europaeus 28.00 2.00e-15 73.90
IUUC-Fca-035873 Felis catus 35.19 4.00e-47 180.00
IUUC-Fal-036921 Ficedula albicollis 34.84 1.00e-46 178.00
IUUC-Fox-037765 Fusarium oxysporum 25.68 4.00e-21 94.40
IUUC-Fso-038240 Fusarium solani 27.40 7.00e-24 103.00
IUUC-Gmo-038864 Gadus morhua 33.22 1.00e-44 171.00
IUUC-Ggr-039862 Gaeumannomyces graminis 25.85 4.00e-20 90.90
IUUC-Gga-040952 Gallus gallus 34.84 2.00e-46 177.00
IUUC-Gac-041677 Gasterosteus aculeatus 33.57 3.00e-44 170.00
IUUC-Gma-043061 Glycine max 27.05 6.00e-18 83.20
IUUC-Ggo-045591 Gorilla gorilla 35.19 3.00e-47 181.00
IUUC-Hsa-046860 Homo sapiens 35.19 4.00e-47 180.00
IUUC-Hvu-047410 Hordeum vulgare 26.00 6.00e-09 52.00
IUUC-Itr-048211 Ictidomys tridecemlineatus 35.19 4.00e-47 180.00
IUUC-Lch-049410 Latimeria chalumnae 32.88 6.00e-26 109.00
IUUC-Lpe-051102 Leersia perrieri 27.56 4.00e-21 93.60
IUUC-Loc-052016 Lepisosteus oculatus 31.12 7.00e-37 146.00
IUUC-Lma-053157 Leptosphaeria maculans 26.37 6.00e-28 116.00
IUUC-Laf-054568 Loxodonta africana 35.19 6.00e-47 179.00
IUUC-Mcc-054613 Macaca mulatta 35.19 3.00e-47 181.00
IUUC-Meu-056832 Macropus eugenii 34.53 5.00e-17 79.30
IUUC-Mor-057104 Magnaporthe oryzae 27.09 2.00e-22 98.60
IUUC-Mtr-058445 Medicago truncatula 26.83 2.00e-27 114.00
IUUC-Mla-059038 Melampsora laricipopulina 24.76 2.00e-18 85.10
IUUC-Mga-059548 Meleagris gallopavo 34.66 3.00e-40 157.00
IUUC-Mvi-060520 Microbotryum violaceum 23.08 5.00e-08 50.40
IUUC-Mdo-062376 Monodelphis domestica 34.84 6.00e-46 176.00
IUUC-Mmu-063254 Mus musculus 35.54 4.00e-47 180.00
IUUC-Mac-065635 Musa acuminata 27.95 3.00e-23 100.00
IUUC-Mpu-066314 Mustela putorius furo 35.19 3.00e-47 180.00
IUUC-Mlu-067512 Myotis lucifugus 35.89 2.00e-48 184.00
IUUC-Nfi-068262 Neosartorya fischeri 26.62 5.00e-28 117.00
IUUC-Ncr-068872 Neurospora crassa 26.42 8.00e-19 86.70
IUUC-Nle-070118 Nomascus leucogenys 35.19 3.00e-47 181.00
IUUC-Opr-071228 Ochotona princeps 35.48 8.00e-41 158.00
IUUC-Ont-072600 Oreochromis niloticus 34.27 5.00e-45 172.00
IUUC-Oan-073584 Ornithorhynchus anatinus 35.86 2.00e-42 164.00
IUUC-Ocu-074542 Oryctolagus cuniculus 35.19 2.00e-47 181.00
IUUC-Oba-075923 Oryza barthii 27.80 3.00e-22 97.40
IUUC-Obr-076313 Oryza brachyantha 27.92 2.00e-22 98.20
IUUC-Ogl-076932 Oryza glaberrima 27.80 3.00e-22 97.40
IUUC-Ogu-078152 Oryza glumaepatula 27.80 3.00e-22 97.40
IUUC-Oin-079528 Oryza indica 27.80 3.00e-22 97.40
IUUC-Olo-080401 Oryza longistaminata 27.80 3.00e-22 97.40
IUUC-Ome-081553 Oryza meridionalis 27.80 2.00e-22 97.80
IUUC-Oni-082090 Oryza nivara 27.80 1.00e-22 98.60
IUUC-Opu-083583 Oryza punctata 27.92 8.00e-22 95.90
IUUC-Oru-084492 Oryza rufipogon 27.80 3.00e-22 97.40
IUUC-Osa-085383 Oryza sativa 27.80 3.00e-22 97.40
IUUC-Ola-086835 Oryzias latipes 34.62 4.00e-46 176.00
IUUC-Olu-087716 Ostreococcus lucimarinus 24.00 1.00e-12 65.90
IUUC-Oga-088886 Otolemur garnettii 35.19 2.00e-47 181.00
IUUC-Oar-090079 Ovis aries 35.19 4.00e-47 180.00
IUUC-Ptr-091457 Pan troglodytes 35.19 4.00e-47 180.00
IUUC-Pan-092317 Papio anubis 32.50 3.00e-24 103.00
IUUC-Psi-093129 Pelodiscus sinensis 35.06 3.00e-40 157.00
IUUC-Pma-094488 Petromyzon marinus 34.84 1.00e-47 181.00
IUUC-Pno-095049 Phaeosphaeria nodorum 26.71 7.00e-29 119.00
IUUC-Ppa-095341 Physcomitrella patens 27.30 2.00e-30 124.00
IUUC-Pfo-096286 Poecilia formosa 32.52 2.00e-43 167.00
IUUC-Pab-097765 Pongo abelii 35.19 4.00e-47 180.00
IUUC-Pop-099131 Populus trichocarpa 27.89 2.00e-27 114.00
IUUC-Pca-100524 Procavia capensis 29.84 2.00e-25 107.00
IUUC-Ppe-101934 Prunus persica 28.57 1.00e-29 121.00
IUUC-Pva-102577 Pteropus vampyrus 35.54 1.00e-47 182.00
IUUC-Pgr-103521 Puccinia graminis 25.16 4.00e-18 84.00
IUUC-Pte-104304 Pyrenophora teres 26.03 1.00e-27 115.00
IUUC-Pyt-104563 Pyrenophora triticirepentis 25.68 6.00e-27 113.00
IUUC-Rno-105717 Rattus norvegicus 35.54 3.00e-47 181.00
IUUC-Sha-107190 Sarcophilus harrisii 34.52 3.00e-44 170.00
IUUC-Sja-107918 Schizosaccharomyces japonicus 25.77 8.00e-24 102.00
IUUC-Spo-108355 Schizosaccharomyces pombe 26.19 1.00e-25 108.00
IUUC-Smo-109374 Selaginella moellendorffii 30.31 2.00e-34 138.00
IUUC-Sit-110119 Setaria italica 26.67 7.00e-20 89.70
IUUC-Sly-111570 Solanum lycopersicum 25.30 6.00e-18 83.20
IUUC-Stu-112308 Solanum tuberosum 28.46 4.00e-24 103.00
IUUC-Sar-113515 Sorex araneus 31.25 8.00e-08 48.90
IUUC-Sbi-114605 Sorghum bicolor 27.02 7.00e-20 90.50
IUUC-Sre-114906 Sporisorium reilianum 31.14 7.00e-33 132.00
IUUC-Tgu-117087 Taeniopygia guttata 34.26 2.00e-39 154.00
IUUC-Tru-117700 Takifugu rubripes 35.66 1.00e-45 175.00
IUUC-Tni-120470 Tetraodon nigroviridis 35.31 7.00e-46 176.00
IUUC-Tca-121109 Theobroma cacao 27.69 4.00e-18 83.60
IUUC-Tre-122095 Trichoderma reesei 26.03 1.00e-20 92.80
IUUC-Tvi-122580 Trichoderma virens 26.37 1.00e-21 96.30
IUUC-Tae-125129 Triticum aestivum 27.37 8.00e-21 92.80
IUUC-Tur-126658 Triticum urartu 24.37 1.00e-15 75.90
IUUC-Tme-127043 Tuber melanosporum 27.70 1.00e-28 119.00
IUUC-Tbe-127927 Tupaia belangeri 35.19 4.00e-47 180.00
IUUC-Ttr-129231 Tursiops truncatus 35.54 1.00e-47 182.00
IUUC-Uma-129578 Ustilago maydis 31.49 6.00e-33 133.00
IUUC-Vda-129730 Verticillium dahliae 27.40 2.00e-27 114.00
IUUC-Vpa-130677 Vicugna pacos 25.90 7.00e-05 40.00
IUUC-Vvi-130968 Vitis vinifera 27.70 4.00e-23 100.00
IUUC-Xtr-132203 Xenopus tropicalis 34.49 7.00e-47 179.00
IUUC-Xma-133972 Xiphophorus maculatus 32.52 2.00e-43 167.00
IUUC-Yli-134553 Yarrowia lipolytica 30.03 6.00e-28 116.00
IUUC-Zma-134941 Zea mays 25.44 1.00e-15 75.50
Created Date 25-Jun-2017

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