iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007575

UUCD1 version

UUC-ArT-00491

Ensembl Protein ID

AT5G67340.1

UniProt Accession

Q5XEZ8; Q0WNF4; Q9FN17; PUB2_ARATH

Genbank Protein ID

BAB09019.1; AED98330.1; ANM70639.1; AAU94381.1; AAV59272.1; BAF01345.1

Protein Name

U-box domain-containing protein 2; Plant U-box protein 2; RING-type E3 ubiquitin transferase PUB2

Genbank Nucleotide ID

AB007645; CP002688; CP002688; BT015818; BT020206; AK229487

Gene Name

PUB2; At5g67340; K8K14.6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT5G67340	AT5G67340.1	AT5G67340.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.20e-26	92.1	240	312

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           vp++f+C++slelM+dPv+++sG+t++r  I+kw++ g   cP+trq l++++l+Pn  +r+   +wce+n++
   Q: 240  VPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNFIVRAFLASWCETNNV 312
           8*********************************************************************975 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Functions as an E3 ubiquitin ligase.

Protein Sequence
(Fasta)

MMVHMEVSWL RVLLDNISSY LSLSSMDDLS SNPAHKYYTR GEDIGKLIKP VLENLIDSDA 60
APSELLNNGF EELAQYVDEL REQFQSWQPL STRIFYVLRI ESLASKLRES SLEVFQLLKH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCTAACGCA TTTATTAAGA GAAAGTATGC ACCAAAAATA TCGTTATTAA TTGACTAAGT 60
AGACCGATAA AACTTTATTT AAGAGATTAA TGGAGCTCAT AATAAATAGC AACAAAAATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0833--Ubl conjugation pathway

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

ath:AT5G67340

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005938	Arabidopsis lyrata	93.69	0.00e+00	1269.00
IUUC-Afl-008696	Aspergillus flavus	29.92	3.00e-20	92.80
IUUC-Ani-009476	Aspergillus nidulans	29.92	3.00e-20	92.80
IUUC-Ang-009574	Aspergillus niger	29.92	4.00e-20	92.40
IUUC-Aor-010194	Aspergillus oryzae	29.92	3.00e-20	92.80
IUUC-Bol-015195	Brassica oleracea	76.17	0.00e+00	1083.00
IUUC-Bra-016628	Brassica rapa	76.90	0.00e+00	1080.00
IUUC-Cel-018336	Caenorhabditis elegans	32.93	4.00e-10	60.50
IUUC-Kpa-049403	Komagataella pastoris	31.08	1.00e-20	94.00
IUUC-Mla-058925	Melampsora laricipopulina	30.18	1.00e-15	77.80
IUUC-Mac-064726	Musa acuminata	41.43	2.00e-139	489.00
IUUC-Ncr-068835	Neurospora crassa	29.92	2.00e-19	90.10
IUUC-Pop-099451	Populus trichocarpa	56.23	0.00e+00	755.00
IUUC-Ppe-101233	Prunus persica	54.06	0.00e+00	719.00
IUUC-Ptt-103922	Puccinia triticina	30.93	4.00e-12	64.70
IUUC-Sce-106415	Saccharomyces cerevisiae	29.88	4.00e-20	92.40
IUUC-Tme-127103	Tuber melanosporum	29.92	1.00e-19	90.50

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence