iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0016s03500	POPTR_0016s03500.1	POPTR_0016s03500.1
POPTR_0016s03500	POPTR_0016s03500.2	POPTR_0016s03500.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.10e-09	39.2	252	288

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 4    edkleqlveMGFdreealqaLraannnleaAveyLld 40
           ed+++ lv+MGFdr+ a+qaL +a n+++ A++ Ll+
   Q: 252  EDAIATLVSMGFDRSSARQALVQARNDINTATNILLE 288
           89*********************************96 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MNGGPSGFSN APVTKTFVIA SAIFTIFLRI KGGPNKLGLS YQDIFRNPRL WKLILSVFAF 60
SSTSEMMFGL YLLYYFRVFE RQIGSNKYLV FILFSVIVSL LFEIFAVALL KDPSANLLTS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCTCAATTT TCCATCTACA ATCAACCTCT TCTTAGAACT CAATTTTTTT TAAAAAAACT 60
TTTAACCAAA TCAAATACCC CCATCAACAA TAACGTAGAA ATTAGTAGAA AGTTCGCCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR022764--Peptidase_S54_rhomboid_dom
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50030--UBA

Pfam

PF00627--UBA

SMART

SM00165--UBA

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004252--F:serine-type endopeptidase activity
GO:0043130--F:ubiquitin binding

KEGG

pop:POPTR_0016s03500g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002884	Amborella trichopoda	69.90	2.00e-71	261.00
IUUC-Acl-008340	Aspergillus clavatus	29.66	9.00e-06	43.50
IUUC-Ani-009335	Aspergillus nidulans	35.90	6.00e-01	31.20
IUUC-Bta-013487	Bos taurus	24.71	2.00e-16	79.30
IUUC-Cja-018818	Callithrix jacchus	27.24	1.00e-19	90.10
IUUC-Cfa-021174	Canis familiaris	27.39	3.00e-20	92.00
IUUC-Cre-022898	Chlamydomonas reinhardtii	37.62	4.00e-23	101.00
IUUC-Cne-026916	Cryptococcus neoformans	29.56	3.00e-13	68.90
IUUC-Cme-027354	Cyanidioschyzon merolae	32.82	2.00e-09	55.80
IUUC-Dre-027633	Danio rerio	27.64	5.00e-21	94.40
IUUC-Dno-029418	Dasypus novemcinctus	25.93	7.00e-19	87.40
IUUC-Eeu-034998	Erinaceus europaeus	24.75	3.00e-16	79.00
IUUC-Gmo-039606	Gadus morhua	27.15	1.00e-12	67.00
IUUC-Kpa-049248	Komagataella pastoris	26.34	2.00e-08	52.80
IUUC-Mla-058868	Melampsora laricipopulina	27.27	3.00e-07	48.50
IUUC-Mga-059639	Meleagris gallopavo	48.84	9.00e-07	45.40
IUUC-Mdo-062640	Monodelphis domestica	27.00	6.00e-20	90.90
IUUC-Ncr-068703	Neurospora crassa	28.38	1.00e-15	76.60
IUUC-Obr-076812	Oryza brachyantha	58.97	2.00e-79	288.00
IUUC-Ola-086714	Oryzias latipes	54.05	7.00e-06	44.30
IUUC-Olu-087791	Ostreococcus lucimarinus	29.49	5.00e-13	67.00
IUUC-Oar-090421	Ovis aries	25.41	7.00e-17	80.90
IUUC-Ppa-095918	Physcomitrella patens	55.48	1.00e-80	292.00
IUUC-Pca-100602	Procavia capensis	43.14	1.00e-06	47.00
IUUC-Pva-102466	Pteropus vampyrus	25.84	2.00e-16	79.70
IUUC-Rno-105226	Rattus norvegicus	26.51	3.00e-17	82.00
IUUC-Sce-106268	Saccharomyces cerevisiae	27.17	4.00e-04	38.10
IUUC-Sha-106739	Sarcophilus harrisii	28.95	8.00e-20	90.50
IUUC-Spo-108285	Schizosaccharomyces pombe	22.73	1.00e-08	53.90
IUUC-Tni-119811	Tetraodon nigroviridis	28.29	2.00e-24	105.00
IUUC-Tbe-127867	Tupaia belangeri	39.66	4.00e-06	45.10
IUUC-Ttr-128543	Tursiops truncatus	25.00	6.00e-17	80.90
IUUC-Uma-129462	Ustilago maydis	24.90	2.00e-07	49.30
IUUC-Vpa-130623	Vicugna pacos	41.38	3.00e-07	48.90
IUUC-Xma-133270	Xiphophorus maculatus	26.84	3.00e-15	75.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence