iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121133

Ensembl Protein ID

EOY18674

UniProt Accession

A0A061FV73; A0A061FV73_THECC

Genbank Protein ID

EOY18674.1

Protein Name

Zinc finger (C3HC4-type RING finger) family protein

Genbank Nucleotide ID

CM001888

Gene Name

TCM_043168

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_043168	EOY18674	EOY18674

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.30e-06	27.8	84	128

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg....plvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iCl+ +k+g     ++  C H fh++C+  ++      + ++++CP+Cr
   Q: 84   CSICLTKMKQGgghaIFTAECSHSFHFHCIaSNV------KHGNQICPVCR 128
           ********776677699999*********97777......**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MGSKWRKAKL ALGLNLCAYL PRTLDDDYSA PPSSERLSDA ALLSPSNWES MASSRPMTPV 60
PSSHGLRLSK SLSRRASKSS KQTCSICLTK MKQGGGHAIF TAECSHSFHF HCIASNVKHG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTAAAACAAA TCAAAAGGTT TTATAATTAT ATACAGTATT TTGACAGCAG TAGCAGTTTG 60
TGATATGGTA ATTGTTTAAT GAAGCATTAT TCAAAAAGCA GCAGCAAAAT CTGTGCTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0732--Signal

Interpro

IPR032838--Vwaint_dom
IPR002035--VWF_A
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50234--VWFA
PS50089--ZF_RING_2

Pfam

PF00092--VWA
PF14624--Vwaint
PF13639--zf-RING_2

SMART

SM00184--RING
SM00327--VWA

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000514	Aegilops tauschii	54.81	0.00e+00	752.00
IUUC-Atr-002481	Amborella trichopoda	37.65	3.00e-72	265.00
IUUC-Aly-005469	Arabidopsis lyrata	64.47	0.00e+00	875.00
IUUC-Ath-007351	Arabidopsis thaliana	65.43	0.00e+00	892.00
IUUC-Bdi-014237	Brachypodium distachyon	55.42	0.00e+00	720.00
IUUC-Bol-016018	Brassica oleracea	63.46	0.00e+00	876.00
IUUC-Bra-016768	Brassica rapa	63.60	0.00e+00	882.00
IUUC-Fox-037681	Fusarium oxysporum	36.92	4.00e-06	45.80
IUUC-Gma-043422	Glycine max	34.08	3.00e-59	222.00
IUUC-Hvu-047585	Hordeum vulgare	55.19	0.00e+00	766.00
IUUC-Lpe-051426	Leersia perrieri	58.26	0.00e+00	809.00
IUUC-Mtr-058161	Medicago truncatula	76.90	0.00e+00	1097.00
IUUC-Ncr-068692	Neurospora crassa	40.62	6.00e-07	48.90
IUUC-Oba-075359	Oryza barthii	58.63	0.00e+00	814.00
IUUC-Obr-076924	Oryza brachyantha	58.04	0.00e+00	813.00
IUUC-Ogl-077314	Oryza glaberrima	61.23	0.00e+00	770.00
IUUC-Ogu-078254	Oryza glumaepatula	58.49	0.00e+00	813.00
IUUC-Oin-079660	Oryza indica	58.22	0.00e+00	810.00
IUUC-Olo-080750	Oryza longistaminata	58.10	0.00e+00	798.00
IUUC-Oni-083041	Oryza nivara	58.36	0.00e+00	812.00
IUUC-Opu-084154	Oryza punctata	58.41	0.00e+00	813.00
IUUC-Oru-084708	Oryza rufipogon	58.22	0.00e+00	808.00
IUUC-Osa-085739	Oryza sativa	58.22	0.00e+00	808.00
IUUC-Sit-109961	Setaria italica	50.63	1.00e-160	559.00
IUUC-Stu-112617	Solanum tuberosum	70.77	0.00e+00	996.00
IUUC-Sbi-114156	Sorghum bicolor	57.64	0.00e+00	780.00
IUUC-Tae-123973	Triticum aestivum	54.93	0.00e+00	701.00
IUUC-Vvi-131452	Vitis vinifera	76.34	0.00e+00	1055.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence