iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sha-106622

Ensembl Protein ID

ENSSHAP00000022286.1

UniProt Accession

G3X3N1; G3X3N1_SARHA

Genbank Protein ID

ENSSHAP00000022286

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01003504

Gene Name

ERCC6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000018860.1	ENSSHAT00000022464.1	ENSSHAP00000022286.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/CUE	67.40	0.00e+00	1821.00	IUUC-Hsa-046895
UBD/Alpha-Helix/UBA	67.40	0.00e+00	1821.00	IUUC-Hsa-046895

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MPNEATQHSG QTQEKDLNSP SFNNAEETAI GPENSAALDK MEESFTPSVF NNSPSTSSVV 60
GMFEVPRKGP PVLHIDRQQI QSVEYSAQAV ELKDLGVDVY DQDVLEQGVL QQVDKAIHEA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCAAACG AAGCTACTCA ACACTCAGGT CAAACTCAAG AGAAAGATTT AAATAGCCCA 60
TCTTTCAACA ATGCTGAAGA AACTGCCATT GGTCCTGAAA ACAGTGCAGC TCTTGATAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER

Pfam

PF00271--Helicase_C
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc

Gene Ontology

GO:0005829--C:cytosol
GO:0005794--C:Golgi apparatus
GO:0005730--C:nucleolus
GO:0008023--C:transcription elongation factor complex
GO:0005524--F:ATP binding
GO:0003682--F:chromatin binding
GO:0003677--F:DNA binding
GO:0008094--F:DNA-dependent ATPase activity
GO:0030296--F:protein tyrosine kinase activator activity
GO:0007256--P:activation of JNKK activity
GO:0007257--P:activation of JUN kinase activity
GO:0006284--P:base-excision repair
GO:0008630--P:intrinsic apoptotic signaling pathway in response to DNA damage
GO:0035264--P:multicellular organism growth
GO:0045494--P:photoreceptor cell maintenance
GO:0032786--P:positive regulation of DNA-templated transcription, elongation
GO:0006290--P:pyrimidine dimer repair
GO:0010332--P:response to gamma radiation
GO:0000303--P:response to superoxide
GO:0009636--P:response to toxic substance
GO:0010224--P:response to UV-B
GO:0010165--P:response to X-ray
GO:0006362--P:transcription elongation from RNA polymerase I promoter
GO:0006283--P:transcription-coupled nucleotide-excision repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000518	Aegilops tauschii	48.18	8.00e-169	587.00
IUUC-Aml-002021	Ailuropoda melanoleuca	68.13	0.00e+00	1806.00
IUUC-Atr-002868	Amborella trichopoda	49.05	4.00e-163	568.00
IUUC-Apl-003989	Anas platyrhynchos	65.65	0.00e+00	1755.00
IUUC-Aca-004609	Anolis carolinensis	67.74	0.00e+00	1244.00
IUUC-Aly-005912	Arabidopsis lyrata	48.15	3.00e-164	572.00
IUUC-Ath-006812	Arabidopsis thaliana	48.83	4.00e-164	572.00
IUUC-Ago-007719	Ashbya gossypii	48.59	7.00e-162	564.00
IUUC-Acl-008050	Aspergillus clavatus	50.43	5.00e-157	548.00
IUUC-Afl-008677	Aspergillus flavus	47.95	7.00e-148	518.00
IUUC-Afu-008975	Aspergillus fumigatus	51.31	7.00e-159	555.00
IUUC-Ani-009464	Aspergillus nidulans	51.24	1.00e-159	557.00
IUUC-Ang-009516	Aspergillus niger	50.09	2.00e-146	513.00
IUUC-Aor-010057	Aspergillus oryzae	48.01	2.00e-150	526.00
IUUC-Ate-010307	Aspergillus terreus	47.63	5.00e-148	518.00
IUUC-Ame-011055	Astyanax mexicanus	68.45	0.00e+00	1239.00
IUUC-Bgr-012211	Blumeria graminis	45.26	7.00e-157	548.00
IUUC-Bta-012761	Bos taurus	64.16	0.00e+00	1342.00
IUUC-Bci-013603	Botrytis cinerea	47.49	8.00e-163	568.00
IUUC-Bdi-014031	Brachypodium distachyon	47.85	5.00e-167	582.00
IUUC-Bol-015096	Brassica oleracea	49.75	2.00e-166	580.00
IUUC-Bra-017583	Brassica rapa	49.83	2.00e-166	580.00
IUUC-Cel-018275	Caenorhabditis elegans	33.22	2.00e-94	340.00
IUUC-Cja-019733	Callithrix jacchus	71.87	0.00e+00	1431.00
IUUC-Cfa-020631	Canis familiaris	65.83	0.00e+00	1776.00
IUUC-Cpo-022218	Cavia porcellus	67.17	0.00e+00	1314.00
IUUC-Cre-022710	Chlamydomonas reinhardtii	45.07	3.00e-135	477.00
IUUC-Csa-023723	Chlorocebus sabaeus	67.09	0.00e+00	1816.00
IUUC-Cho-024312	Choloepus hoffmanni	65.28	0.00e+00	791.00
IUUC-Cin-025376	Ciona intestinalis	48.86	0.00e+00	776.00
IUUC-Cgl-026654	Colletotrichum gloeosporioides	46.83	2.00e-145	509.00
IUUC-Cme-027109	Cyanidioschyzon merolae	47.62	3.00e-138	486.00
IUUC-Dre-028672	Danio rerio	57.42	0.00e+00	1340.00
IUUC-Dno-028893	Dasypus novemcinctus	64.71	0.00e+00	1720.00
IUUC-Dor-031114	Dipodomys ordii	60.62	0.00e+00	1155.00
IUUC-Dse-031225	Dothistroma septosporum	49.06	6.00e-163	568.00
IUUC-Ete-032713	Echinops telfairi	63.38	0.00e+00	828.00
IUUC-Eca-034071	Equus caballus	65.82	0.00e+00	1754.00
IUUC-Eeu-034781	Erinaceus europaeus	68.55	0.00e+00	1431.00
IUUC-Fca-036561	Felis catus	66.32	0.00e+00	1771.00
IUUC-Fal-037343	Ficedula albicollis	61.63	0.00e+00	1618.00
IUUC-Fox-037667	Fusarium oxysporum	45.02	2.00e-135	477.00
IUUC-Fso-038331	Fusarium solani	46.56	8.00e-140	491.00
IUUC-Gmo-039132	Gadus morhua	59.54	0.00e+00	1119.00
IUUC-Gga-040376	Gallus gallus	65.86	0.00e+00	1771.00
IUUC-Gac-042326	Gasterosteus aculeatus	74.38	0.00e+00	904.00
IUUC-Gma-043401	Glycine max	48.11	1.00e-163	570.00
IUUC-Ggo-044844	Gorilla gorilla	67.53	0.00e+00	1839.00
IUUC-Hsa-046895	Homo sapiens	67.46	0.00e+00	1840.00
IUUC-Itr-048071	Ictidomys tridecemlineatus	66.80	0.00e+00	1831.00
IUUC-Kpa-049261	Komagataella pastoris	47.62	5.00e-172	598.00
IUUC-Lch-049934	Latimeria chalumnae	57.39	0.00e+00	1293.00
IUUC-Lpe-051249	Leersia perrieri	46.39	7.00e-135	474.00
IUUC-Loc-052591	Lepisosteus oculatus	60.21	0.00e+00	1457.00
IUUC-Lma-053210	Leptosphaeria maculans	48.37	2.00e-150	526.00
IUUC-Laf-054403	Loxodonta africana	67.74	0.00e+00	1777.00
IUUC-Mcc-054876	Macaca mulatta	67.39	0.00e+00	1833.00
IUUC-Meu-056545	Macropus eugenii	81.54	0.00e+00	651.00
IUUC-Mor-057145	Magnaporthe oryzae	44.50	4.00e-151	528.00
IUUC-Mpo-057493	Magnaporthe poae	44.39	4.00e-149	522.00
IUUC-Mtr-057734	Medicago truncatula	46.05	2.00e-164	573.00
IUUC-Mga-059402	Meleagris gallopavo	65.81	0.00e+00	1764.00
IUUC-Mmr-061791	Microcebus murinus	67.37	0.00e+00	1845.00
IUUC-Mdo-062148	Monodelphis domestica	81.64	0.00e+00	2175.00
IUUC-Mmu-063238	Mus musculus	64.53	0.00e+00	1727.00
IUUC-Mac-064440	Musa acuminata	49.40	2.00e-166	579.00
IUUC-Mpu-066112	Mustela putorius furo	67.53	0.00e+00	1806.00
IUUC-Mlu-067057	Myotis lucifugus	66.29	0.00e+00	1770.00
IUUC-Nfi-068617	Neosartorya fischeri	50.79	1.00e-158	553.00
IUUC-Ncr-068920	Neurospora crassa	46.60	1.00e-152	533.00
IUUC-Nle-069992	Nomascus leucogenys	67.26	0.00e+00	1834.00
IUUC-Opr-070929	Ochotona princeps	62.14	0.00e+00	1460.00
IUUC-Ont-071740	Oreochromis niloticus	58.65	0.00e+00	1140.00
IUUC-Oan-073380	Ornithorhynchus anatinus	66.57	0.00e+00	846.00
IUUC-Ocu-074143	Oryctolagus cuniculus	68.52	0.00e+00	1326.00
IUUC-Oba-075626	Oryza barthii	48.72	2.00e-161	563.00
IUUC-Obr-076240	Oryza brachyantha	47.68	8.00e-166	577.00
IUUC-Ogl-077187	Oryza glaberrima	48.72	3.00e-161	562.00
IUUC-Ogu-078629	Oryza glumaepatula	47.17	6.00e-131	461.00
IUUC-Oin-079268	Oryza indica	48.89	2.00e-161	563.00
IUUC-Olo-080567	Oryza longistaminata	46.98	1.00e-130	461.00
IUUC-Oni-082122	Oryza nivara	48.89	1.00e-161	564.00
IUUC-Opu-083477	Oryza punctata	48.55	2.00e-164	573.00
IUUC-Oru-084783	Oryza rufipogon	48.89	1.00e-161	564.00
IUUC-Osa-086206	Oryza sativa	48.89	4.00e-160	558.00
IUUC-Oga-088414	Otolemur garnettii	66.16	0.00e+00	1788.00
IUUC-Oar-089697	Ovis aries	69.02	0.00e+00	1451.00
IUUC-Ptr-090856	Pan troglodytes	67.59	0.00e+00	1840.00
IUUC-Pan-092521	Papio anubis	67.42	0.00e+00	1835.00
IUUC-Psi-093037	Pelodiscus sinensis	66.02	0.00e+00	1540.00
IUUC-Pma-094456	Petromyzon marinus	62.00	0.00e+00	767.00
IUUC-Pno-094861	Phaeosphaeria nodorum	47.16	2.00e-148	520.00
IUUC-Ppa-095711	Physcomitrella patens	47.13	3.00e-163	569.00
IUUC-Pfo-096223	Poecilia formosa	77.74	0.00e+00	946.00
IUUC-Pab-098595	Pongo abelii	67.38	0.00e+00	1834.00
IUUC-Pop-099531	Populus trichocarpa	48.22	1.00e-163	570.00
IUUC-Pca-100770	Procavia capensis	59.11	4.00e-169	589.00
IUUC-Ppe-101528	Prunus persica	47.44	9.00e-165	574.00
IUUC-Pva-102247	Pteropus vampyrus	63.03	0.00e+00	928.00
IUUC-Pte-104217	Pyrenophora teres	48.11	4.00e-150	525.00
IUUC-Pyt-104797	Pyrenophora triticirepentis	47.56	6.00e-152	531.00
IUUC-Rno-105742	Rattus norvegicus	64.16	0.00e+00	1684.00
IUUC-Sce-106234	Saccharomyces cerevisiae	47.62	2.00e-164	572.00
IUUC-Sja-107874	Schizosaccharomyces japonicus	47.26	4.00e-167	582.00
IUUC-Spo-108021	Schizosaccharomyces pombe	48.45	8.00e-169	587.00
IUUC-Ssl-108500	Sclerotinia sclerotiorum	50.09	4.00e-160	558.00
IUUC-Smo-109132	Selaginella moellendorffii	47.44	2.00e-159	556.00
IUUC-Sit-110066	Setaria italica	48.63	6.00e-166	578.00
IUUC-Sly-111833	Solanum lycopersicum	47.53	3.00e-168	586.00
IUUC-Stu-112189	Solanum tuberosum	47.54	2.00e-167	583.00
IUUC-Sar-113511	Sorex araneus	61.62	0.00e+00	985.00
IUUC-Sbi-114606	Sorghum bicolor	48.29	1.00e-165	577.00
IUUC-Ssc-116374	Sus scrofa	66.53	0.00e+00	1843.00
IUUC-Tgu-117153	Taeniopygia guttata	61.11	0.00e+00	1535.00
IUUC-Tru-118178	Takifugu rubripes	59.54	0.00e+00	1162.00
IUUC-Tsy-119524	Tarsius syrichta	66.84	0.00e+00	1821.00
IUUC-Tni-120546	Tetraodon nigroviridis	58.10	0.00e+00	1113.00
IUUC-Tca-121065	Theobroma cacao	48.36	3.00e-163	569.00
IUUC-Tre-121868	Trichoderma reesei	45.52	1.00e-138	487.00
IUUC-Tvi-122455	Trichoderma virens	45.52	1.00e-135	478.00
IUUC-Tae-123249	Triticum aestivum	48.18	8.00e-169	588.00
IUUC-Tur-126107	Triticum urartu	48.18	2.00e-169	589.00
IUUC-Tbe-127967	Tupaia belangeri	67.63	0.00e+00	879.00
IUUC-Ttr-128768	Tursiops truncatus	65.72	0.00e+00	1817.00
IUUC-Vda-129884	Verticillium dahliae	46.08	5.00e-156	545.00
IUUC-Vpa-130521	Vicugna pacos	69.42	0.00e+00	939.00
IUUC-Vvi-130838	Vitis vinifera	46.25	1.00e-164	574.00
IUUC-Xtr-132056	Xenopus tropicalis	53.79	0.00e+00	1043.00
IUUC-Xma-133113	Xiphophorus maculatus	58.08	0.00e+00	1127.00
IUUC-Yli-134344	Yarrowia lipolytica	48.95	6.00e-167	581.00
IUUC-Zma-134837	Zea mays	48.63	1.00e-163	570.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence