iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099361

Ensembl Protein ID

POPTR_0002s04590.1

UniProt Accession

B9GS71; B9GS71_POPTR

Genbank Protein ID

EEE80077.2

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_798526; POPTR_0002s04590g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s04590	POPTR_0002s04590.1	POPTR_0002s04590.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	7.20e-19	68.9	105	190

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt.lt..........elknsevalkYeDedGDlvtlksDedldkavsllaskksllrlli 81
           + vkvs +g+++++++dl+++ ++ +Llka+++ ++          ++++s++a++YeD+dGD++ l++D+++d+++s       ++rl+i
   Q: 105  MYVKVSVDGAPYLRKIDLKVYRSYPELLKALEDmFKltigeysekeGYNGSDFAPTYEDKDGDWM-LVGDVPWDMFIS------TCKRLRI 188
           579******************************7336699999999*******************.************......9****** PP
   S: 82   qk 83
           +k
   Q: 189  MK 190
           98 PP

Organism

Populus trichocarpa

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MERSMAYERH LNLKATELRL GLPGSDEPEK PSTTPSVRSN KRASPEISEE SGSKGSSSLS 60
SNVENSEGDD APPAKAQVVG WPPIRSYRKN CLQPKKNDRV DGAGMYVKVS VDGAPYLRKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAGAAATAG TTCAACTTTG ATTGATTTGG AATATTCAAG AATTCCCTCT GCGCAAGAGG 60
TTGTAGCCAA AAGAGAGATT AATTATTGTT TGGCATCATC AAGTTTTGCT CTAAGATTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

pop:POPTR_0002s04590g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bci-013911	Botrytis cinerea	32.26	8.10e-01	27.30
IUUC-Bdi-014020	Brachypodium distachyon	50.70	1.00e-41	161.00
IUUC-Dre-027789	Danio rerio	39.53	1.10e+00	27.30
IUUC-Dse-031496	Dothistroma septosporum	45.00	8.00e+00	26.20
IUUC-Hvu-047853	Hordeum vulgare	49.77	6.00e-44	169.00
IUUC-Ncr-068890	Neurospora crassa	36.07	1.70e-01	29.60
IUUC-Oba-075141	Oryza barthii	52.91	5.00e-49	186.00
IUUC-Oin-079780	Oryza indica	52.91	1.00e-46	178.00
IUUC-Oni-083078	Oryza nivara	52.91	1.00e-46	178.00
IUUC-Oru-084991	Oryza rufipogon	52.91	1.00e-46	178.00
IUUC-Osa-085321	Oryza sativa	52.91	1.00e-46	178.00
IUUC-Tni-120011	Tetraodon nigroviridis	34.88	9.40e-01	27.70

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence