iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098975

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000354

Gene Name

POPTRDRAFT_261065; POPTR_0018s01710g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0018s01710	POPTR_0018s01710.1	POPTR_0018s01710.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	64.65	0.00e+00	820.00	IUUC-Ath-006790
E3 adaptor/Cullin RING/SCF/F-box	24.00	6.00e-24	107.00	IUUC-Ots-000001

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSKVFEFAGE NDFCPGGPIY TNPKEPSLFL SLGLPVDVYF PSRKRSRISA PFVFSEERFE 60
QKKQASIEVL PDECLFEIFR RLPGGEERSA CACVSKRWLI LLSSICRDEL CSQNRSAVKN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTACTAGGGT GTATTGTCAT GTACCAAGAC CCATAAACTC TCTGTAATAA AATCCTTTCA 60
TCAGCTACAC ACACTTTATT CATTCATTTC TTTCCCTTTT ATCTTCTTTC TCTCTCTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR006553--Leu-rich_rpt_Cys-con_subtyp

Pfam

PF00646--F-box
PF13516--LRR_6

SMART

SM00256--FBOX
SM00367--LRR_CC

KEGG

pop:POPTR_0018s01710g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002552	Amborella trichopoda	55.67	0.00e+00	687.00
IUUC-Aly-006311	Arabidopsis lyrata	64.65	0.00e+00	801.00
IUUC-Ath-006790	Arabidopsis thaliana	64.65	0.00e+00	801.00
IUUC-Ani-009369	Aspergillus nidulans	22.00	6.00e-26	111.00
IUUC-Cpo-022482	Cavia porcellus	26.41	4.00e-30	126.00
IUUC-Fox-037823	Fusarium oxysporum	23.67	7.00e-26	112.00
IUUC-Fso-038381	Fusarium solani	24.61	7.00e-27	115.00
IUUC-Gga-040609	Gallus gallus	24.70	7.00e-31	128.00
IUUC-Kpa-049356	Komagataella pastoris	26.23	6.00e-25	108.00
IUUC-Olu-087859	Ostreococcus lucimarinus	20.80	6.00e-04	38.50
IUUC-Oga-089110	Otolemur garnettii	27.03	9.00e-28	117.00
IUUC-Ppa-095810	Physcomitrella patens	34.32	3.00e-91	329.00
IUUC-Pva-102941	Pteropus vampyrus	23.40	3.00e-28	120.00
IUUC-Ptt-103850	Puccinia triticina	25.00	3.00e-07	50.10
IUUC-Sha-107390	Sarcophilus harrisii	25.22	1.00e-26	114.00
IUUC-Spo-108035	Schizosaccharomyces pombe	26.20	7.00e-13	68.60
IUUC-Smo-109612	Selaginella moellendorffii	38.31	4.00e-108	385.00
IUUC-Sly-111002	Solanum lycopersicum	62.00	0.00e+00	831.00
IUUC-Stu-112036	Solanum tuberosum	63.49	0.00e+00	843.00
IUUC-Tbe-128120	Tupaia belangeri	26.80	1.00e-26	114.00
IUUC-Uma-129602	Ustilago maydis	23.88	4.00e-23	103.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence