iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gga-040412

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

E3 ubiquitin-protein ligase BRE1A

Genbank Nucleotide ID

AC186541

Gene Name

RNF20

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGALG00000015548.6	ENSGALT00000025065.6	ENSGALP00000025019.3

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	28.68	4.00e-25	114.00	IUUC-Ath-007462
E3 activity/RING/RING	37.59	1.00e-39	161.00	IUUC-Cel-018659
E3 activity/RING/RING	55.32	8.00e-97	352.00	IUUC-Dme-032034
E3 activity/RING/RING	89.48	0.00e+00	902.00	IUUC-Hsa-046462
E3 activity/RING/RING	23.22	1.00e-14	77.40	IUUC-Sce-106384
E3 activity/RING/RING	43.08	2.00e-14	76.30	IUUC-Spo-108304

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Gallus gallus

Protein Sequence
(Fasta)

MSGAGNKRAA GEPGPSAPPE KKAGVEDSGT TVETIKLGGV SSTEELDIRT LQTKNRKLAE 60
MLDQRQAIED ELREHIEKLE RRQATDDASL LIINRYWNQF DENIRIILKR FDLDQGLGDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGATTTGCTT TCCGGAGGGC CTGAGGAAGG CGGCAGGGGG TTGTTTTAGG GTGGGTGGGG 60
GCGGCAGGGG GTTGTTTTAG GGTGGGTGGG TGGGTGGGTG GGGGCGGCGG CGGCGGCCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0033503--C:HULC complex
GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0003682--F:chromatin binding
GO:0003730--F:mRNA 3'-UTR binding
GO:0003713--F:transcription coactivator activity
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0033523--P:histone H2B ubiquitination
GO:0010390--P:histone monoubiquitination
GO:0030336--P:negative regulation of cell migration
GO:1900364--P:negative regulation of mRNA polyadenylation
GO:2001168--P:positive regulation of histone H2B ubiquitination
GO:0031062--P:positive regulation of histone methylation
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0000209--P:protein polyubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001976	Ailuropoda melanoleuca	88.17	0.00e+00	949.00
IUUC-Atr-002836	Amborella trichopoda	30.06	2.00e-24	107.00
IUUC-Apl-003407	Anas platyrhynchos	96.98	0.00e+00	1082.00
IUUC-Aca-004246	Anolis carolinensis	89.68	0.00e+00	990.00
IUUC-Aly-006055	Arabidopsis lyrata	27.39	5.00e-27	116.00
IUUC-Ath-007462	Arabidopsis thaliana	27.39	8.00e-27	115.00
IUUC-Ago-007988	Ashbya gossypii	39.39	4.00e-14	72.80
IUUC-Acl-008319	Aspergillus clavatus	27.15	5.00e-14	72.80
IUUC-Ang-009601	Aspergillus niger	26.42	5.00e-16	79.70
IUUC-Aor-010142	Aspergillus oryzae	29.14	2.00e-15	77.40
IUUC-Ate-010547	Aspergillus terreus	26.46	7.00e-14	72.40
IUUC-Ame-011916	Astyanax mexicanus	77.65	3.00e-144	505.00
IUUC-Bgr-012245	Blumeria graminis	41.51	4.00e-10	59.70
IUUC-Bta-012357	Bos taurus	87.32	0.00e+00	945.00
IUUC-Bci-013926	Botrytis cinerea	44.19	3.00e-08	53.50
IUUC-Bdi-015006	Brachypodium distachyon	26.08	7.00e-26	112.00
IUUC-Bra-016664	Brassica rapa	53.03	4.00e-18	86.70
IUUC-Cel-018659	Caenorhabditis elegans	33.87	9.00e-41	161.00
IUUC-Cja-019244	Callithrix jacchus	89.76	0.00e+00	928.00
IUUC-Cfa-020320	Canis familiaris	90.22	0.00e+00	943.00
IUUC-Cpo-021617	Cavia porcellus	87.12	0.00e+00	935.00
IUUC-Cre-022940	Chlamydomonas reinhardtii	35.29	2.00e-06	47.40
IUUC-Csa-023509	Chlorocebus sabaeus	90.13	0.00e+00	934.00
IUUC-Cho-024616	Choloepus hoffmanni	81.99	8.00e-142	497.00
IUUC-Cin-025174	Ciona intestinalis	58.38	1.00e-102	367.00
IUUC-Csv-025830	Ciona savignyi	53.42	1.00e-90	328.00
IUUC-Cgl-026569	Colletotrichum gloeosporioides	40.38	2.00e-09	57.40
IUUC-Cne-026878	Cryptococcus neoformans	25.58	1.00e-15	78.60
IUUC-Cme-027134	Cyanidioschyzon merolae	39.06	7.00e-14	72.00
IUUC-Dre-028146	Danio rerio	78.21	4.00e-143	502.00
IUUC-Dno-029537	Dasypus novemcinctus	88.75	0.00e+00	929.00
IUUC-Dor-030250	Dipodomys ordii	83.66	0.00e+00	878.00
IUUC-Dse-031300	Dothistroma septosporum	27.35	1.00e-15	78.20
IUUC-Dme-032034	Drosophila melanogaster	38.44	4.00e-93	335.00
IUUC-Ete-033164	Echinops telfairi	93.91	2.00e-175	609.00
IUUC-Eca-033347	Equus caballus	87.68	0.00e+00	944.00
IUUC-Eeu-034801	Erinaceus europaeus	88.48	2.00e-155	543.00
IUUC-Fca-036024	Felis catus	90.04	0.00e+00	944.00
IUUC-Fal-037622	Ficedula albicollis	96.09	0.00e+00	1073.00
IUUC-Fox-038017	Fusarium oxysporum	25.11	3.00e-10	60.10
IUUC-Fso-038414	Fusarium solani	38.46	4.00e-09	56.20
IUUC-Gmo-039446	Gadus morhua	77.55	1.00e-132	467.00
IUUC-Ggr-040117	Gaeumannomyces graminis	45.28	2.00e-11	64.70
IUUC-Gac-042205	Gasterosteus aculeatus	58.48	1.00e-139	490.00
IUUC-Gma-043027	Glycine max	29.69	3.00e-35	143.00
IUUC-Ggo-044703	Gorilla gorilla	90.13	0.00e+00	934.00
IUUC-Hsa-046462	Homo sapiens	90.13	0.00e+00	934.00
IUUC-Hvu-047689	Hordeum vulgare	28.65	3.00e-28	120.00
IUUC-Itr-048298	Ictidomys tridecemlineatus	87.80	0.00e+00	910.00
IUUC-Kpa-049345	Komagataella pastoris	33.87	3.00e-10	60.10
IUUC-Lch-049505	Latimeria chalumnae	74.38	0.00e+00	710.00
IUUC-Lpe-051253	Leersia perrieri	31.32	7.00e-33	135.00
IUUC-Loc-051951	Lepisosteus oculatus	66.76	3.00e-111	396.00
IUUC-Lma-053312	Leptosphaeria maculans	38.20	2.00e-14	74.70
IUUC-Laf-054122	Loxodonta africana	90.04	0.00e+00	942.00
IUUC-Mcc-054647	Macaca mulatta	90.13	0.00e+00	934.00
IUUC-Meu-056559	Macropus eugenii	85.82	0.00e+00	878.00
IUUC-Mor-057068	Magnaporthe oryzae	43.40	9.00e-12	65.50
IUUC-Mpo-057568	Magnaporthe poae	45.28	2.00e-11	64.30
IUUC-Mtr-057632	Medicago truncatula	28.69	1.00e-32	135.00
IUUC-Mla-059072	Melampsora laricipopulina	25.27	6.00e-25	109.00
IUUC-Mga-059731	Meleagris gallopavo	72.78	0.00e+00	661.00
IUUC-Mvi-060341	Microbotryum violaceum	28.14	4.00e-21	96.70
IUUC-Mmr-061495	Microcebus murinus	88.17	0.00e+00	950.00
IUUC-Mdo-062599	Monodelphis domestica	90.75	0.00e+00	974.00
IUUC-Mmu-063278	Mus musculus	88.07	0.00e+00	937.00
IUUC-Mac-065103	Musa acuminata	28.65	2.00e-37	151.00
IUUC-Mpu-065910	Mustela putorius furo	88.33	0.00e+00	946.00
IUUC-Mlu-067040	Myotis lucifugus	88.93	0.00e+00	928.00
IUUC-Ncr-068695	Neurospora crassa	26.39	1.00e-11	65.10
IUUC-Nle-069058	Nomascus leucogenys	90.13	0.00e+00	934.00
IUUC-Opr-071149	Ochotona princeps	87.32	0.00e+00	920.00
IUUC-Ont-072543	Oreochromis niloticus	75.83	3.00e-135	476.00
IUUC-Oan-072996	Ornithorhynchus anatinus	95.29	0.00e+00	627.00
IUUC-Ocu-074773	Oryctolagus cuniculus	89.76	0.00e+00	930.00
IUUC-Oba-075000	Oryza barthii	30.31	3.00e-30	126.00
IUUC-Obr-076532	Oryza brachyantha	29.20	7.00e-30	125.00
IUUC-Ogl-077200	Oryza glaberrima	30.85	3.00e-31	130.00
IUUC-Ogu-078279	Oryza glumaepatula	30.31	3.00e-30	126.00
IUUC-Oin-079097	Oryza indica	30.85	3.00e-31	130.00
IUUC-Olo-080612	Oryza longistaminata	48.33	4.00e-14	73.90
IUUC-Ome-081304	Oryza meridionalis	30.45	3.00e-30	127.00
IUUC-Oni-082162	Oryza nivara	30.31	3.00e-30	126.00
IUUC-Opu-083683	Oryza punctata	45.45	3.00e-15	77.40
IUUC-Oru-084382	Oryza rufipogon	30.31	4.00e-30	126.00
IUUC-Osa-085839	Oryza sativa	45.45	3.00e-15	77.40
IUUC-Ola-087287	Oryzias latipes	77.25	5.00e-133	468.00
IUUC-Olu-087683	Ostreococcus lucimarinus	36.36	4.00e-14	70.10
IUUC-Oga-088961	Otolemur garnettii	88.17	0.00e+00	951.00
IUUC-Oar-089755	Ovis aries	87.68	0.00e+00	937.00
IUUC-Ptr-091602	Pan troglodytes	90.13	0.00e+00	934.00
IUUC-Pan-092263	Papio anubis	90.13	0.00e+00	934.00
IUUC-Psi-093554	Pelodiscus sinensis	91.76	0.00e+00	1017.00
IUUC-Pno-095079	Phaeosphaeria nodorum	33.33	5.00e-13	69.70
IUUC-Ppa-095332	Physcomitrella patens	31.59	2.00e-40	160.00
IUUC-Pfo-097527	Poecilia formosa	77.37	2.00e-135	476.00
IUUC-Pab-098598	Pongo abelii	89.94	0.00e+00	933.00
IUUC-Pop-099583	Populus trichocarpa	27.94	9.00e-31	127.00
IUUC-Pca-100157	Procavia capensis	87.89	0.00e+00	909.00
IUUC-Ppe-102065	Prunus persica	27.67	1.00e-26	115.00
IUUC-Pva-102720	Pteropus vampyrus	87.99	0.00e+00	927.00
IUUC-Pgr-103536	Puccinia graminis	24.51	2.00e-19	91.30
IUUC-Pte-104415	Pyrenophora teres	32.58	1.00e-12	68.20
IUUC-Pyt-104762	Pyrenophora triticirepentis	41.82	2.00e-12	67.40
IUUC-Rno-104996	Rattus norvegicus	88.43	0.00e+00	944.00
IUUC-Sce-106384	Saccharomyces cerevisiae	23.22	2.00e-15	77.80
IUUC-Sha-107000	Sarcophilus harrisii	91.70	0.00e+00	949.00
IUUC-Sja-107993	Schizosaccharomyces japonicus	45.00	1.00e-12	68.20
IUUC-Spo-108304	Schizosaccharomyces pombe	43.08	8.00e-15	75.50
IUUC-Ssl-108546	Sclerotinia sclerotiorum	37.74	3.00e-08	53.50
IUUC-Smo-109550	Selaginella moellendorffii	30.42	9.00e-40	158.00
IUUC-Sit-109889	Setaria italica	27.87	1.00e-30	128.00
IUUC-Sly-111490	Solanum lycopersicum	31.86	1.00e-36	148.00
IUUC-Sar-113349	Sorex araneus	89.19	0.00e+00	865.00
IUUC-Sbi-114734	Sorghum bicolor	30.93	4.00e-24	104.00
IUUC-Sre-115087	Sporisorium reilianum	36.45	7.00e-16	79.00
IUUC-Ssc-115723	Sus scrofa	87.99	0.00e+00	947.00
IUUC-Tgu-116549	Taeniopygia guttata	95.83	0.00e+00	995.00
IUUC-Tru-118776	Takifugu rubripes	59.85	7.00e-138	484.00
IUUC-Tsy-118808	Tarsius syrichta	89.09	3.00e-160	558.00
IUUC-Tni-120790	Tetraodon nigroviridis	76.26	7.00e-136	478.00
IUUC-Tca-121060	Theobroma cacao	29.20	6.00e-33	135.00
IUUC-Tre-122150	Trichoderma reesei	39.62	3.00e-10	60.50
IUUC-Tvi-122431	Trichoderma virens	37.74	2.00e-09	57.80
IUUC-Tae-123217	Triticum aestivum	23.62	9.00e-20	92.40
IUUC-Tur-126160	Triticum urartu	47.76	7.00e-16	79.30
IUUC-Tme-127177	Tuber melanosporum	37.74	6.00e-10	59.30
IUUC-Tbe-127597	Tupaia belangeri	70.90	5.00e-126	445.00
IUUC-Ttr-128266	Tursiops truncatus	86.79	0.00e+00	932.00
IUUC-Uma-129488	Ustilago maydis	25.08	5.00e-19	89.70
IUUC-Vda-129815	Verticillium dahliae	42.55	2.00e-09	57.80
IUUC-Vpa-130237	Vicugna pacos	87.86	0.00e+00	943.00
IUUC-Vvi-131316	Vitis vinifera	30.21	8.00e-31	129.00
IUUC-Xtr-132589	Xenopus tropicalis	75.91	0.00e+00	720.00
IUUC-Xma-133365	Xiphophorus maculatus	59.74	1.00e-133	470.00
IUUC-Yli-134445	Yarrowia lipolytica	39.06	6.00e-13	69.30
IUUC-Zma-135598	Zea mays	28.21	9.00e-29	122.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence