iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017998

Ensembl Protein ID

Bra040518.1-P

UniProt Accession

M4FHE0; M4FHE0_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra040518	Bra040518.1	Bra040518.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.00e-11	44.9	1263	1309

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           vC++Cg  ++d+ s++ C+ C+  +H  Cl+++     p+ + w+Cp+C 
   Q: 1263 VCKICGVDKDDD-SVLLCDTCDAEYHTYCLNPP-LIRIPDGN-WYCPSCV 1309
           8*****999977.7*******************.9******6.******6 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MELTDSTKKQ LGETRSAALD EDNRSFLGID LNEIPTGVTP GGAVQDDDGE YEPVEVVRSI 60
HDNPDPAPGA PAEVPEPDRD AACGACGRPE SMELVVVCDA CERGFHLNCV NDGVEAAPSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAACTCA CTGATTCTAC GAAAAAGCAA CTCGGAGAGA CCAGGAGCGC CGCTCTCGAC 60
GAAGATAATC GCTCCTTTCT CGGCATCGAT CTTAACGAAA TCCCTACCGG CGTTACTCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001487--Bromodomain
IPR016177--DNA-bd_dom
IPR003889--FYrich_C
IPR003888--FYrich_N
IPR001739--Methyl_CpG_DNA-bd
IPR028942--WHIM1_dom
IPR028941--WHIM2_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51543--FYRC
PS51542--FYRN
PS50982--MBD
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF05964--FYRN
PF01429--MBD
PF00628--PHD
PF15612--WHIM1
PF15613--WSD

SMART

SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000077	Aegilops tauschii	41.38	2.00e-154	540.00
IUUC-Aml-001963	Ailuropoda melanoleuca	54.00	6.00e-13	70.50
IUUC-Atr-002838	Amborella trichopoda	40.13	0.00e+00	1093.00
IUUC-Apl-003524	Anas platyrhynchos	52.83	3.00e-06	47.40
IUUC-Aca-004712	Anolis carolinensis	56.00	3.00e-06	48.10
IUUC-Aly-006097	Arabidopsis lyrata	80.44	0.00e+00	3321.00
IUUC-Ath-007218	Arabidopsis thaliana	79.92	0.00e+00	3241.00
IUUC-Acl-008162	Aspergillus clavatus	48.94	2.00e-12	69.30
IUUC-Afl-008625	Aspergillus flavus	48.94	2.00e-12	68.60
IUUC-Afu-008796	Aspergillus fumigatus	48.94	1.00e-12	69.70
IUUC-Ani-009139	Aspergillus nidulans	48.94	9.00e-13	70.10
IUUC-Aor-010155	Aspergillus oryzae	48.94	2.00e-12	68.60
IUUC-Ate-010453	Aspergillus terreus	44.68	1.00e-11	66.20
IUUC-Ame-010620	Astyanax mexicanus	56.00	2.00e-13	72.00
IUUC-Bci-013992	Botrytis cinerea	41.67	1.00e-10	62.80
IUUC-Bdi-014742	Brachypodium distachyon	35.06	1.00e-149	523.00
IUUC-Bol-015506	Brassica oleracea	93.70	0.00e+00	3983.00
IUUC-Cja-019443	Callithrix jacchus	41.38	2.00e-13	72.40
IUUC-Cre-022637	Chlamydomonas reinhardtii	53.33	6.00e-09	51.60
IUUC-Cho-024280	Choloepus hoffmanni	54.00	7.00e-13	70.10
IUUC-Cin-025321	Ciona intestinalis	52.08	3.00e-11	64.70
IUUC-Cgl-026613	Colletotrichum gloeosporioides	34.92	3.00e-09	58.20
IUUC-Cne-026801	Cryptococcus neoformans	48.94	5.00e-13	70.10
IUUC-Dse-031479	Dothistroma septosporum	40.82	1.00e-09	60.10
IUUC-Dme-032021	Drosophila melanogaster	50.94	1.00e-12	69.70
IUUC-Ete-033144	Echinops telfairi	54.00	4.00e-13	71.20
IUUC-Eca-034265	Equus caballus	54.00	6.00e-13	70.50
IUUC-Fso-038127	Fusarium solani	41.27	2.00e-11	65.90
IUUC-Gmo-039140	Gadus morhua	56.00	6.00e-14	73.60
IUUC-Gga-040802	Gallus gallus	46.15	1.00e-13	73.20
IUUC-Gac-041825	Gasterosteus aculeatus	58.49	4.00e-15	77.40
IUUC-Gma-042823	Glycine max	44.17	0.00e+00	1474.00
IUUC-Ggo-044856	Gorilla gorilla	54.00	6.00e-13	70.50
IUUC-Hvu-047583	Hordeum vulgare	33.80	1.00e-136	480.00
IUUC-Lpe-050785	Leersia perrieri	37.58	0.00e+00	998.00
IUUC-Mcc-055474	Macaca mulatta	50.94	3.00e-13	71.60
IUUC-Mpo-057317	Magnaporthe poae	38.10	7.00e-09	57.00
IUUC-Mtr-058285	Medicago truncatula	43.91	0.00e+00	1501.00
IUUC-Mga-059358	Meleagris gallopavo	47.69	9.00e-14	73.20
IUUC-Mmr-061032	Microcebus murinus	54.00	6.00e-06	47.00
IUUC-Mdo-062754	Monodelphis domestica	54.00	6.00e-06	47.40
IUUC-Mac-065069	Musa acuminata	42.97	0.00e+00	840.00
IUUC-Mlu-068086	Myotis lucifugus	56.00	2.00e-13	71.60
IUUC-Nfi-068430	Neosartorya fischeri	48.94	1.00e-12	69.70
IUUC-Ont-072274	Oreochromis niloticus	60.00	7.00e-15	76.60
IUUC-Oan-073160	Ornithorhynchus anatinus	52.83	7.00e-07	50.10
IUUC-Ocu-074440	Oryctolagus cuniculus	54.00	6.00e-06	47.00
IUUC-Oba-075854	Oryza barthii	37.46	0.00e+00	1091.00
IUUC-Obr-076343	Oryza brachyantha	36.90	0.00e+00	1098.00
IUUC-Ogl-077886	Oryza glaberrima	37.33	5.00e-170	591.00
IUUC-Ogu-078887	Oryza glumaepatula	36.17	0.00e+00	1103.00
IUUC-Olo-080668	Oryza longistaminata	37.58	0.00e+00	1095.00
IUUC-Ome-081800	Oryza meridionalis	37.41	0.00e+00	1090.00
IUUC-Oni-082593	Oryza nivara	37.51	0.00e+00	1093.00
IUUC-Opu-083363	Oryza punctata	36.11	0.00e+00	1088.00
IUUC-Oru-084298	Oryza rufipogon	38.36	0.00e+00	1088.00
IUUC-Osa-085487	Oryza sativa	36.09	8.00e-154	537.00
IUUC-Psi-093550	Pelodiscus sinensis	43.59	4.00e-13	71.20
IUUC-Pma-094733	Petromyzon marinus	55.32	9.00e-13	68.60
IUUC-Pno-094879	Phaeosphaeria nodorum	51.22	4.00e-11	64.30
IUUC-Ppa-095893	Physcomitrella patens	36.30	1.00e-97	352.00
IUUC-Ppe-101198	Prunus persica	48.45	0.00e+00	1578.00
IUUC-Pgr-103434	Puccinia graminis	55.10	7.00e-17	81.30
IUUC-Pte-104195	Pyrenophora teres	51.06	1.00e-13	72.80
IUUC-Pyt-104566	Pyrenophora triticirepentis	51.06	1.00e-13	72.80
IUUC-Rno-105673	Rattus norvegicus	54.00	4.00e-06	47.80
IUUC-Sce-106207	Saccharomyces cerevisiae	42.31	2.00e-11	64.30
IUUC-Sha-107506	Sarcophilus harrisii	44.74	2.00e-13	72.00
IUUC-Spo-108283	Schizosaccharomyces pombe	55.56	6.00e-13	70.50
IUUC-Ssl-108489	Sclerotinia sclerotiorum	41.67	1.00e-10	63.20
IUUC-Sit-110633	Setaria italica	38.29	0.00e+00	1022.00
IUUC-Sar-113477	Sorex araneus	54.00	5.00e-13	70.50
IUUC-Sre-115066	Sporisorium reilianum	47.92	1.00e-11	65.50
IUUC-Tgu-117452	Taeniopygia guttata	50.00	3.00e-13	71.20
IUUC-Tca-121595	Theobroma cacao	47.40	0.00e+00	1756.00
IUUC-Tre-122213	Trichoderma reesei	37.14	4.00e-11	64.70
IUUC-Tvi-122263	Trichoderma virens	39.68	8.00e-11	63.50
IUUC-Tae-123821	Triticum aestivum	37.32	0.00e+00	1011.00
IUUC-Tur-126242	Triticum urartu	41.46	2.00e-153	536.00
IUUC-Tme-127087	Tuber melanosporum	45.83	3.00e-10	61.60
IUUC-Tbe-128040	Tupaia belangeri	54.00	8.00e-06	46.60
IUUC-Uma-129590	Ustilago maydis	45.10	5.00e-11	64.30
IUUC-Vpa-130433	Vicugna pacos	54.00	4.00e-06	47.00
IUUC-Vvi-130929	Vitis vinifera	43.33	0.00e+00	1481.00
IUUC-Xtr-132008	Xenopus tropicalis	39.60	5.00e-14	73.90
IUUC-Zma-135560	Zea mays	35.80	0.00e+00	1055.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence