iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pab-097738

Ensembl Protein ID

ENSPPYP00000010781.2

UniProt Accession

H2NXQ6; H2NXQ6_PONAB

Genbank Protein ID

ENSPPYP00000010781

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABGA01033326

Gene Name

RAD23A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000009617.2	ENSPPYT00000011203.2	ENSPPYP00000010781.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	6.50e-21	73.9	149	188
ULD/UDP/UBQ/UBQ_PIM	4.60e-17	61.8	11	67

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 2    ededkleqlveMGFdreealqaLraannnleaAveyLldg 41
           e+e +l ++++MG++re+++ aLra++nn+ +AveyLl+g
   Q: 149  EYETMLTEIMSMGYERERVVAALRASYNNPHRAVEYLLTG 188
           7899**********************************97 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 22   tveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
            v+ lKeki++e+g   +p++ qkLIyaGkiL+Dd +++++ i+++++v+++v+k+k
   Q: 11   QVKVLKEKIEAEKGrdaFPVAGQKLIYAGKILSDDVPIRDYRIDEKNFVVVMVTKTK 67
           5999**************************************************987 PP

Organism

Pongo abelii

Protein Sequence
(Fasta)

MAVTITLKTL QVKVLKEKIE AEKGRDAFPV AGQKLIYAGK ILSDDVPIRD YRIDEKNFVV 60
VMVTKTKAGQ GTSAPPEASP TAAPESSTSF LPAPTSGMSH PPPAAREDKS PSEESAPTTS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGTCA CCATCACGCT CAAAACGCTG CAGCANNNNN NNNNNNNNNN NNNNNNNNNN 60
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005815--C:microtubule organizing center
GO:0005654--C:nucleoplasm
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0045070--P:positive regulation of viral genome replication
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	38.11	2.00e-32	133.00
IUUC-Aml-001515	Ailuropoda melanoleuca	96.76	9.00e-143	499.00
IUUC-Atr-003116	Amborella trichopoda	41.56	9.00e-31	127.00
IUUC-Aca-004704	Anolis carolinensis	78.45	4.00e-107	380.00
IUUC-Aly-006159	Arabidopsis lyrata	34.78	1.00e-44	173.00
IUUC-Ani-009460	Aspergillus nidulans	38.80	3.00e-29	122.00
IUUC-Bgr-012056	Blumeria graminis	36.11	2.00e-17	82.80
IUUC-Bta-012377	Bos taurus	92.29	1.00e-137	482.00
IUUC-Bdi-014253	Brachypodium distachyon	38.93	4.00e-32	132.00
IUUC-Bol-015272	Brassica oleracea	33.25	7.00e-46	177.00
IUUC-Bra-016970	Brassica rapa	34.48	2.00e-45	176.00
IUUC-Cel-018364	Caenorhabditis elegans	30.89	5.00e-21	94.70
IUUC-Cja-018946	Callithrix jacchus	93.39	6.00e-145	506.00
IUUC-Cfa-020577	Canis familiaris	93.39	2.00e-144	504.00
IUUC-Cpo-021850	Cavia porcellus	89.53	6.00e-156	543.00
IUUC-Csa-023183	Chlorocebus sabaeus	95.87	4.00e-146	510.00
IUUC-Csv-025823	Ciona savignyi	37.78	1.00e-29	122.00
IUUC-Cgl-026495	Colletotrichum gloeosporioides	33.15	4.00e-16	79.00
IUUC-Cme-027260	Cyanidioschyzon merolae	26.27	1.00e-22	100.00
IUUC-Dno-030017	Dasypus novemcinctus	95.03	1.00e-129	456.00
IUUC-Dor-030358	Dipodomys ordii	81.04	1.00e-115	409.00
IUUC-Dme-032027	Drosophila melanogaster	36.97	6.00e-55	207.00
IUUC-Eca-033599	Equus caballus	93.22	2.00e-138	484.00
IUUC-Fca-036051	Felis catus	92.56	3.00e-142	497.00
IUUC-Fso-038107	Fusarium solani	49.50	1.00e-15	77.40
IUUC-Gmo-038528	Gadus morhua	59.37	3.00e-86	311.00
IUUC-Gga-040133	Gallus gallus	86.98	5.00e-75	274.00
IUUC-Gac-042298	Gasterosteus aculeatus	60.81	3.00e-83	301.00
IUUC-Gma-044245	Glycine max	35.97	7.00e-47	181.00
IUUC-Ggo-045084	Gorilla gorilla	96.14	4.00e-146	510.00
IUUC-Hsa-046614	Homo sapiens	96.14	9.00e-147	512.00
IUUC-Hvu-047832	Hordeum vulgare	39.34	4.00e-32	132.00
IUUC-Itr-047875	Ictidomys tridecemlineatus	93.66	2.00e-163	568.00
IUUC-Lch-050563	Latimeria chalumnae	60.55	3.00e-96	345.00
IUUC-Loc-051758	Lepisosteus oculatus	62.54	6.00e-87	313.00
IUUC-Lma-053328	Leptosphaeria maculans	50.94	3.00e-08	49.30
IUUC-Laf-054589	Loxodonta africana	93.11	3.00e-136	478.00
IUUC-Mcc-055860	Macaca mulatta	95.87	4.00e-146	510.00
IUUC-Meu-056459	Macropus eugenii	93.95	5.00e-105	374.00
IUUC-Mtr-058239	Medicago truncatula	33.24	1.00e-41	164.00
IUUC-Mmr-060819	Microcebus murinus	93.39	2.00e-155	541.00
IUUC-Mdo-062742	Monodelphis domestica	85.13	6.00e-138	483.00
IUUC-Mmu-063929	Mus musculus	90.91	2.00e-152	531.00
IUUC-Mac-065180	Musa acuminata	33.51	8.00e-39	154.00
IUUC-Mpu-066684	Mustela putorius furo	93.39	7.00e-147	513.00
IUUC-Mlu-067787	Myotis lucifugus	91.18	4.00e-140	490.00
IUUC-Nle-069846	Nomascus leucogenys	84.47	2.00e-125	441.00
IUUC-Ont-072271	Oreochromis niloticus	56.81	7.00e-87	313.00
IUUC-Oan-073572	Ornithorhynchus anatinus	76.86	2.00e-121	428.00
IUUC-Ocu-074968	Oryctolagus cuniculus	90.84	2.00e-95	343.00
IUUC-Oba-075392	Oryza barthii	38.71	4.00e-32	132.00
IUUC-Obr-076909	Oryza brachyantha	34.05	8.00e-38	150.00
IUUC-Ogl-077067	Oryza glaberrima	34.32	3.00e-42	165.00
IUUC-Ogu-078883	Oryza glumaepatula	38.71	4.00e-32	132.00
IUUC-Oin-079817	Oryza indica	38.71	5.00e-32	131.00
IUUC-Olo-080929	Oryza longistaminata	38.71	3.00e-32	132.00
IUUC-Ome-081866	Oryza meridionalis	38.71	3.00e-32	132.00
IUUC-Oni-083092	Oryza nivara	38.71	5.00e-32	131.00
IUUC-Opu-083756	Oryza punctata	39.44	6.00e-34	137.00
IUUC-Oru-084816	Oryza rufipogon	38.71	5.00e-32	131.00
IUUC-Osa-086112	Oryza sativa	38.71	5.00e-32	131.00
IUUC-Oga-089075	Otolemur garnettii	93.66	8.00e-140	489.00
IUUC-Oar-090387	Ovis aries	92.01	3.00e-135	474.00
IUUC-Ptr-090912	Pan troglodytes	99.71	2.00e-149	521.00
IUUC-Pan-092140	Papio anubis	95.87	2.00e-145	508.00
IUUC-Psi-093347	Pelodiscus sinensis	66.56	8.00e-68	250.00
IUUC-Pfo-096607	Poecilia formosa	64.53	8.00e-94	337.00
IUUC-Pop-099642	Populus trichocarpa	34.97	2.00e-44	173.00
IUUC-Pca-100348	Procavia capensis	90.66	3.00e-136	478.00
IUUC-Ppe-101368	Prunus persica	34.85	7.00e-45	174.00
IUUC-Pva-102412	Pteropus vampyrus	93.66	2.00e-146	511.00
IUUC-Pgr-103618	Puccinia graminis	37.31	5.00e-25	108.00
IUUC-Rno-105569	Rattus norvegicus	91.18	9.00e-140	489.00
IUUC-Sha-106918	Sarcophilus harrisii	86.05	3.00e-130	457.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	40.42	3.00e-33	135.00
IUUC-Smo-109518	Selaginella moellendorffii	38.25	8.00e-32	130.00
IUUC-Sit-109813	Setaria italica	35.44	7.00e-41	160.00
IUUC-Sbi-114459	Sorghum bicolor	30.73	1.00e-38	153.00
IUUC-Ssc-115460	Sus scrofa	92.84	6.00e-144	503.00
IUUC-Tsy-119385	Tarsius syrichta	76.47	2.00e-61	228.00
IUUC-Tni-120493	Tetraodon nigroviridis	60.63	3.00e-92	332.00
IUUC-Tca-121594	Theobroma cacao	36.02	1.00e-44	173.00
IUUC-Tre-121911	Trichoderma reesei	42.11	1.00e-25	110.00
IUUC-Tur-126610	Triticum urartu	38.11	9.00e-33	135.00
IUUC-Tbe-127603	Tupaia belangeri	84.67	3.00e-55	209.00
IUUC-Ttr-129232	Tursiops truncatus	83.20	6.00e-134	469.00
IUUC-Xma-133647	Xiphophorus maculatus	64.14	7.00e-91	327.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence