iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017093

Ensembl Protein ID

Bra027275.1-P

UniProt Accession

M4EER3; M4EER3_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra027275	Bra027275.1	Bra027275.1-P

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	67.51	2.00e-98	355.00	IUUC-Ath-007424

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brassica rapa

Protein Sequence
(Fasta)

MASASSSGGV AGRLRNASLV LVGDNDSTIS DIRKAVTLMK NIAVQLEKDN QTEKVKDLEN 60
SVAELLDLYG DCAHRSSAIQ SVANGNQPGE QGNRLLLHLT DFKKLLDDEF TKLKATTPSV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTCGG CGTCCTCTTC AGGCGGAGTC GCCGGAAGGC TTCGAAACGC ATCGTTGGTT 60
CTCGTAGGCG ATAACGATTC CACAATCTCT GTGAGTACTT TTCGTTCAAA CCACCTCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR026846--Nse2(Mms21)
IPR004181--Znf_MIZ
IPR013083--Znf_RING/FYVE/PHD

Pfam

PF11789--zf-Nse

Gene Ontology

GO:0005634--C:nucleus
GO:0030915--C:Smc5-Smc6 complex
GO:0019789--F:SUMO transferase activity
GO:0008270--F:zinc ion binding
GO:0000724--P:double-strand break repair via homologous recombination
GO:0060250--P:germ-line stem-cell niche homeostasis
GO:0032876--P:negative regulation of DNA endoreduplication
GO:0008284--P:positive regulation of cell proliferation
GO:0080038--P:positive regulation of cytokinin-activated signaling pathway
GO:0045931--P:positive regulation of mitotic cell cycle
GO:0010082--P:regulation of root meristem growth

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000276	Aegilops tauschii	38.26	2.00e-44	171.00
IUUC-Atr-002438	Amborella trichopoda	39.93	2.00e-47	181.00
IUUC-Aca-004433	Anolis carolinensis	24.16	3.00e-06	45.10
IUUC-Aly-006133	Arabidopsis lyrata	70.59	3.00e-116	410.00
IUUC-Ath-007424	Arabidopsis thaliana	68.51	4.00e-113	400.00
IUUC-Ame-010902	Astyanax mexicanus	31.40	4.00e-06	44.70
IUUC-Bdi-014403	Brachypodium distachyon	40.22	4.00e-50	190.00
IUUC-Bol-015454	Brassica oleracea	84.12	5.00e-132	462.00
IUUC-Cgl-026430	Colletotrichum gloeosporioides	32.14	7.00e-03	34.70
IUUC-Cme-027175	Cyanidioschyzon merolae	33.33	2.00e-03	36.60
IUUC-Dre-028325	Danio rerio	25.62	2.00e-03	35.80
IUUC-Dse-031273	Dothistroma septosporum	36.00	7.00e-05	41.60
IUUC-Dme-031933	Drosophila melanogaster	30.86	2.00e-06	45.80
IUUC-Fal-037038	Ficedula albicollis	24.08	3.00e-05	41.60
IUUC-Fox-037843	Fusarium oxysporum	28.33	4.00e-06	45.40
IUUC-Fso-038272	Fusarium solani	27.87	1.00e-05	43.90
IUUC-Gac-042591	Gasterosteus aculeatus	23.42	8.00e-06	43.50
IUUC-Gma-043177	Glycine max	43.91	5.00e-59	220.00
IUUC-Hvu-047252	Hordeum vulgare	38.84	2.00e-49	188.00
IUUC-Lpe-051150	Leersia perrieri	39.27	5.00e-56	210.00
IUUC-Loc-052687	Lepisosteus oculatus	22.48	1.00e-03	36.20
IUUC-Lma-053255	Leptosphaeria maculans	20.86	6.60e-02	32.00
IUUC-Mpo-057462	Magnaporthe poae	27.27	3.70e-02	32.70
IUUC-Mtr-058011	Medicago truncatula	42.86	3.00e-61	227.00
IUUC-Mac-065639	Musa acuminata	45.11	1.00e-57	216.00
IUUC-Ncr-068773	Neurospora crassa	31.88	4.00e-04	38.90
IUUC-Ont-071575	Oreochromis niloticus	32.29	1.00e-06	46.20
IUUC-Oba-075725	Oryza barthii	42.13	1.00e-48	185.00
IUUC-Obr-076506	Oryza brachyantha	45.33	5.00e-50	190.00
IUUC-Ogl-077564	Oryza glaberrima	46.55	2.00e-44	171.00
IUUC-Ogu-079018	Oryza glumaepatula	42.98	2.00e-49	188.00
IUUC-Oin-079792	Oryza indica	42.55	4.00e-49	187.00
IUUC-Olo-080864	Oryza longistaminata	37.61	1.00e-14	71.60
IUUC-Ome-081426	Oryza meridionalis	42.98	3.00e-49	187.00
IUUC-Oni-082286	Oryza nivara	42.98	1.00e-49	189.00
IUUC-Opu-083586	Oryza punctata	42.55	1.00e-48	185.00
IUUC-Oru-085158	Oryza rufipogon	42.98	1.00e-49	189.00
IUUC-Osa-085872	Oryza sativa	35.48	2.00e-10	57.40
IUUC-Pma-094198	Petromyzon marinus	28.95	4.00e-05	40.00
IUUC-Ppa-095570	Physcomitrella patens	32.13	3.00e-39	154.00
IUUC-Pop-099559	Populus trichocarpa	47.84	2.00e-72	265.00
IUUC-Ppe-101873	Prunus persica	52.99	9.00e-74	269.00
IUUC-Pte-104390	Pyrenophora teres	22.60	2.00e-05	43.50
IUUC-Pyt-104633	Pyrenophora triticirepentis	22.39	2.00e-05	43.10
IUUC-Sja-107983	Schizosaccharomyces japonicus	24.74	6.00e-05	40.80
IUUC-Smo-109438	Selaginella moellendorffii	35.60	4.00e-27	114.00
IUUC-Sit-109919	Setaria italica	40.15	6.00e-55	207.00
IUUC-Sly-111667	Solanum lycopersicum	45.71	6.00e-67	246.00
IUUC-Stu-112211	Solanum tuberosum	46.24	2.00e-67	248.00
IUUC-Sbi-113916	Sorghum bicolor	42.31	2.00e-59	221.00
IUUC-Tgu-116472	Taeniopygia guttata	20.98	5.00e-04	37.70
IUUC-Tru-117771	Takifugu rubripes	23.12	6.00e-05	40.80
IUUC-Tni-119821	Tetraodon nigroviridis	30.12	2.00e-04	38.90
IUUC-Tca-121272	Theobroma cacao	50.18	7.00e-73	266.00
IUUC-Tre-122049	Trichoderma reesei	31.15	2.00e-06	46.20
IUUC-Tvi-122642	Trichoderma virens	29.51	5.00e-06	45.10
IUUC-Tae-122969	Triticum aestivum	38.37	3.00e-51	194.00
IUUC-Tur-126346	Triticum urartu	36.96	2.00e-42	165.00
IUUC-Tme-126988	Tuber melanosporum	26.15	3.00e-06	45.80
IUUC-Vvi-131486	Vitis vinifera	48.16	6.00e-65	239.00
IUUC-Yli-134676	Yarrowia lipolytica	29.58	2.00e-04	39.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence