iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131129

Ensembl Protein ID

VIT_06s0009g03800.t01

UniProt Accession

F6HA06; F6HA06_VITVI

Genbank Protein ID

CCB49026.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595504

Gene Name

VIT_06s0009g03800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_06s0009g03800	VIT_06s0009g03800.t01	VIT_06s0009g03800.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.00e-08	34.8	596	638

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 4    ClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           C +C+  g+    l++C+ C  ++H +C++ + ++ lp+ + w+Cp+C 
   Q: 596  CCLCKMDGN----LICCDGCPAAYHSRCVGVA-SDLLPDGD-WYCPECA 638
           768877777....*******************.*******7.******5 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MEFVGRPVKK EFHGFGIFSG LVKSYDPESG FFEILYEDGD SEELEWSELA FLLEGEVADP 60
GLVELTQKPR VGRKPKKRRR VEIKPENPEN SGNTSGHLDN LNGGFSETLG KSGEGVGKFG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGTTTG TGGGAAGACC AGTGAAGAAG GAGTTTCATG GGTTTGGGAT TTTCTCGGGA 60
CTCGTCAAAT CCTATGACCC AGAATCTGGT TTCTTCGAAA TACTGTACGA AGATGGCGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018501--DDT_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50827--DDT
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF02791--DDT
PF00628--PHD

SMART

SM00571--DDT
SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

vvi:100260139

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000221	Aegilops tauschii	28.40	2.00e-64	241.00
IUUC-Atr-002974	Amborella trichopoda	37.34	0.00e+00	891.00
IUUC-Aly-006239	Arabidopsis lyrata	39.85	1.00e-72	268.00
IUUC-Ath-007130	Arabidopsis thaliana	40.90	2.00e-70	261.00
IUUC-Ani-009451	Aspergillus nidulans	34.02	2.00e-10	60.80
IUUC-Ate-010574	Aspergillus terreus	44.07	7.00e-09	55.50
IUUC-Bdi-014962	Brachypodium distachyon	29.89	2.00e-115	410.00
IUUC-Bol-015269	Brassica oleracea	37.04	9.00e-153	534.00
IUUC-Bra-018092	Brassica rapa	40.96	5.00e-149	521.00
IUUC-Cho-024758	Choloepus hoffmanni	23.75	2.00e-20	95.10
IUUC-Fox-038014	Fusarium oxysporum	37.50	9.00e-12	65.50
IUUC-Fso-038262	Fusarium solani	47.14	4.00e-12	66.60
IUUC-Gma-043962	Glycine max	31.72	2.00e-138	486.00
IUUC-Hvu-047760	Hordeum vulgare	36.65	2.00e-126	446.00
IUUC-Lpe-051272	Leersia perrieri	46.05	3.00e-112	399.00
IUUC-Mtr-058758	Medicago truncatula	44.36	0.00e+00	1253.00
IUUC-Mac-065252	Musa acuminata	31.40	3.00e-133	469.00
IUUC-Oba-075584	Oryza barthii	40.78	0.00e+00	674.00
IUUC-Obr-076085	Oryza brachyantha	45.04	2.00e-112	400.00
IUUC-Ogl-077125	Oryza glaberrima	40.78	0.00e+00	674.00
IUUC-Ogu-078256	Oryza glumaepatula	40.88	0.00e+00	687.00
IUUC-Oin-079426	Oryza indica	40.98	0.00e+00	692.00
IUUC-Olo-080881	Oryza longistaminata	41.27	0.00e+00	695.00
IUUC-Ome-081742	Oryza meridionalis	40.88	0.00e+00	689.00
IUUC-Oni-082756	Oryza nivara	40.98	0.00e+00	692.00
IUUC-Opu-083742	Oryza punctata	45.69	2.00e-117	416.00
IUUC-Oru-085016	Oryza rufipogon	40.98	0.00e+00	692.00
IUUC-Olu-087787	Ostreococcus lucimarinus	37.78	5.00e-04	39.30
IUUC-Pfo-096749	Poecilia formosa	23.24	1.00e-21	99.40
IUUC-Pop-099219	Populus trichocarpa	33.01	8.00e-77	282.00
IUUC-Ppe-101582	Prunus persica	51.05	0.00e+00	1407.00
IUUC-Spo-108017	Schizosaccharomyces pombe	40.82	3.00e-08	52.80
IUUC-Smo-109246	Selaginella moellendorffii	37.88	2.00e-60	227.00
IUUC-Sit-110833	Setaria italica	41.26	0.00e+00	717.00
IUUC-Sly-111813	Solanum lycopersicum	37.96	2.00e-69	257.00
IUUC-Sbi-114222	Sorghum bicolor	44.81	4.00e-122	432.00
IUUC-Tca-121553	Theobroma cacao	41.69	1.00e-75	278.00
IUUC-Tvi-122509	Trichoderma virens	51.02	3.00e-10	59.30
IUUC-Tae-125366	Triticum aestivum	39.00	0.00e+00	659.00
IUUC-Tur-126797	Triticum urartu	39.89	1.00e-61	231.00
IUUC-Xma-133609	Xiphophorus maculatus	23.24	1.00e-21	99.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence