iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109340

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-protein ligase, PUB13

Genbank Nucleotide ID

GL377630

Gene Name

PUB13-2; SELMODRAFT_181353

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_181353	EFJ13827	EFJ13827

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-33	115.8	257	329

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +pe+f+CpIslelM+dPv++++G+ty+rs+I+kwl+ g+ktcP+t+q+l +  l+Pn++lr+li +wce+n++
   Q: 257  IPEDFRCPISLELMKDPVIVATGQTYERSYIQKWLDAGHKTCPITQQTLPHLVLTPNYVLRSLICQWCETNGI 329
           8*********************************************************************987 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MAGQGEFQEL VETLIGLLNE ISSLGDYARS HRKECTNLAR RLKLLAPLLE EAREASSLDS 60
LSPFHDLKLV LHSAKDLLSL CHKGSKIFLI MKREGIASSF QSVTADLEHV LDSLPYNSLN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGGAC AAGGTGAGTT CCAGGAGCTG GTGGAGACTC TCATTGGGCT GCTCAACGAG 60
ATATCATCCC TGGGGGACTA CGCCAGATCG CACCGCAAGG AATGCACCAA TCTCGCCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0016874--F:ligase activity
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

smo:SELMODRAFT_181353

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002932	Amborella trichopoda	55.02	0.00e+00	630.00
IUUC-Aly-005681	Arabidopsis lyrata	52.47	4.00e-172	597.00
IUUC-Bdi-014691	Brachypodium distachyon	51.98	2.00e-150	525.00
IUUC-Fso-038217	Fusarium solani	32.79	8.00e-20	91.30
IUUC-Hvu-047272	Hordeum vulgare	52.02	1.00e-150	525.00
IUUC-Lpe-051517	Leersia perrieri	53.35	3.00e-149	521.00
IUUC-Mac-064441	Musa acuminata	46.36	4.00e-126	444.00
IUUC-Pyt-104569	Pyrenophora triticirepentis	31.58	4.00e-18	85.50
IUUC-Sly-111662	Solanum lycopersicum	53.41	1.00e-170	592.00
IUUC-Stu-111979	Solanum tuberosum	53.25	8.00e-170	589.00
IUUC-Tae-124061	Triticum aestivum	51.70	1.00e-152	532.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence