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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Cel-018465
Ensembl Protein ID F28D1.1
UniProt Accession Q19873; Q19873_CAEEL
Genbank Protein ID CAA94597.1
Protein Name WD Repeat protein
Genbank Nucleotide ID BX284604
Gene Name wdr-46; CELE_F28D1.1; F28D1.1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00009211 F28D1.1 F28D1.1
Annotation
mRNA Expression
GEO
DNA & RNA Element
microRNARAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.10e-06 29.0 331 368
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H + v ++a  +  +++++ + D ++++WD+r +++l+
   Q: 331  HLSAVKGIAVdDQgNYMATTGLDRKCRIWDVRMFRQLH 368
           9999******7336******************999886 PP
   
Organism Caenorhabditis elegans
Protein Sequence
(Fasta)
MPPIKRSKPD GGVKKISITA TDVTPAKGVE EKMSWKEYKK MKQHTGGGTR NKLKKKQRPP 60
TENTEGRAKK PKVLTKEQLE RHDTGADQID PSSMRSKLQQ EKMKVTKDKF QRRIEATAKA 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Cel-018465|E3,WD_repeat|Caenorhabditis elegans
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TAATGCCGCC AATCAAAAGA TCCAAGCCAG ATGGTGGAGT CAAGAAAATC TCGATCACGG 60
CTACCGATGT CACACCTGCA AAGGGTGTGG AGGAGAAAAT GAGCTGGAAA GAGTATAAAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Cel-018465|E3,WD_repeat|Caenorhabditis elegans
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR012952--BING4_C_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF08149--BING4CT
PF00400--WD40
SMART

SM01033--BING4CT
SM00320--WD40
Gene Ontology

GO:0030686--C:90S preribosome
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
KEGG cel:CELE_F28D1.1
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000921 Aegilops tauschii 42.45 3.00e-85 308.00
IUUC-Atr-002528 Amborella trichopoda 39.00 2.00e-86 311.00
IUUC-Aly-005663 Arabidopsis lyrata 41.90 8.00e-89 319.00
IUUC-Ath-007405 Arabidopsis thaliana 38.75 4.00e-88 317.00
IUUC-Ang-009764 Aspergillus niger 44.79 3.00e-108 384.00
IUUC-Ame-011572 Astyanax mexicanus 45.86 3.00e-117 414.00
IUUC-Bdi-014459 Brachypodium distachyon 42.97 2.00e-86 311.00
IUUC-Bol-015965 Brassica oleracea 40.31 1.00e-89 322.00
IUUC-Bra-016837 Brassica rapa 39.78 2.00e-87 314.00
IUUC-Cre-022704 Chlamydomonas reinhardtii 39.71 3.00e-100 357.00
IUUC-Cgl-026438 Colletotrichum gloeosporioides 42.14 5.00e-102 363.00
IUUC-Cne-026784 Cryptococcus neoformans 35.13 2.00e-71 261.00
IUUC-Dre-028533 Danio rerio 42.96 4.00e-115 407.00
IUUC-Dse-031280 Dothistroma septosporum 40.24 4.00e-91 327.00
IUUC-Eeu-034982 Erinaceus europaeus 47.16 3.00e-68 251.00
IUUC-Fox-037980 Fusarium oxysporum 42.61 3.00e-98 351.00
IUUC-Fso-038154 Fusarium solani 42.55 9.00e-99 352.00
IUUC-Gmo-039548 Gadus morhua 46.93 1.00e-121 428.00
IUUC-Ggr-039976 Gaeumannomyces graminis 39.57 4.00e-101 360.00
IUUC-Gac-042249 Gasterosteus aculeatus 49.32 1.00e-122 432.00
IUUC-Gma-043274 Glycine max 43.66 7.00e-89 320.00
IUUC-Hvu-047436 Hordeum vulgare 43.73 9.00e-63 232.00
IUUC-Kpa-049329 Komagataella pastoris 44.35 5.00e-99 353.00
IUUC-Lpe-051501 Leersia perrieri 42.51 4.00e-85 310.00
IUUC-Loc-051736 Lepisosteus oculatus 48.23 3.00e-118 417.00
IUUC-Meu-056419 Macropus eugenii 52.89 2.00e-102 364.00
IUUC-Mor-057146 Magnaporthe oryzae 41.76 5.00e-99 353.00
IUUC-Mpo-057512 Magnaporthe poae 39.18 3.00e-103 367.00
IUUC-Mtr-058139 Medicago truncatula 41.79 8.00e-93 333.00
IUUC-Mla-059028 Melampsora laricipopulina 42.06 3.00e-84 304.00
IUUC-Mvi-060533 Microbotryum violaceum 42.49 9.00e-89 319.00
IUUC-Mac-065643 Musa acuminata 42.05 1.00e-87 315.00
IUUC-Ont-071977 Oreochromis niloticus 47.75 1.00e-119 422.00
IUUC-Oba-075525 Oryza barthii 42.75 4.00e-92 330.00
IUUC-Obr-076468 Oryza brachyantha 42.26 2.00e-90 325.00
IUUC-Ogl-077395 Oryza glaberrima 42.75 4.00e-92 330.00
IUUC-Ogu-078730 Oryza glumaepatula 42.75 7.00e-92 330.00
IUUC-Oin-079797 Oryza indica 42.75 4.00e-92 330.00
IUUC-Olo-080539 Oryza longistaminata 42.51 2.00e-91 328.00
IUUC-Oni-082635 Oryza nivara 42.75 5.00e-92 330.00
IUUC-Opu-083733 Oryza punctata 42.75 4.00e-93 333.00
IUUC-Oru-084560 Oryza rufipogon 42.75 4.00e-92 330.00
IUUC-Osa-085463 Oryza sativa 42.75 4.00e-92 330.00
IUUC-Ola-086667 Oryzias latipes 52.18 9.00e-127 446.00
IUUC-Olu-087881 Ostreococcus lucimarinus 42.97 3.00e-91 328.00
IUUC-Pma-094742 Petromyzon marinus 51.37 2.00e-106 378.00
IUUC-Ppa-095230 Physcomitrella patens 42.61 1.00e-94 338.00
IUUC-Pop-099756 Populus trichocarpa 42.20 2.00e-87 314.00
IUUC-Ppe-101354 Prunus persica 41.79 1.00e-87 315.00
IUUC-Pte-104146 Pyrenophora teres 38.77 3.00e-92 331.00
IUUC-Pyt-104559 Pyrenophora triticirepentis 38.33 5.00e-92 330.00
IUUC-Sce-106227 Saccharomyces cerevisiae 43.03 2.00e-98 351.00
IUUC-Sja-107925 Schizosaccharomyces japonicus 38.24 4.00e-98 350.00
IUUC-Spo-108359 Schizosaccharomyces pombe 43.73 3.00e-97 347.00
IUUC-Smo-108814 Selaginella moellendorffii 43.85 6.00e-102 363.00
IUUC-Sit-110158 Setaria italica 42.82 7.00e-85 306.00
IUUC-Sly-111569 Solanum lycopersicum 43.66 9.00e-86 309.00
IUUC-Stu-112403 Solanum tuberosum 43.66 1.00e-86 312.00
IUUC-Sbi-113839 Sorghum bicolor 45.32 3.00e-89 321.00
IUUC-Sre-115150 Sporisorium reilianum 40.66 1.00e-91 329.00
IUUC-Tru-118535 Takifugu rubripes 51.12 5.00e-124 436.00
IUUC-Tca-121165 Theobroma cacao 40.79 5.00e-87 313.00
IUUC-Tre-122114 Trichoderma reesei 38.91 7.00e-101 359.00
IUUC-Tvi-122437 Trichoderma virens 40.52 6.00e-100 356.00
IUUC-Tae-123887 Triticum aestivum 42.93 2.00e-82 298.00
IUUC-Tur-126078 Triticum urartu 43.49 1.00e-80 292.00
IUUC-Tme-127208 Tuber melanosporum 46.87 3.00e-104 370.00
IUUC-Ttr-129047 Tursiops truncatus 43.23 1.00e-113 402.00
IUUC-Uma-129320 Ustilago maydis 44.82 3.00e-92 331.00
IUUC-Vda-129926 Verticillium dahliae 39.53 1.00e-104 372.00
IUUC-Vvi-131643 Vitis vinifera 40.56 2.00e-82 298.00
IUUC-Yli-134674 Yarrowia lipolytica 42.40 9.00e-100 355.00
IUUC-Zma-135903 Zea mays 44.05 2.00e-81 294.00
Created Date 25-Jun-2017

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