iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099355

Ensembl Protein ID

POPTR_0002s22770.1

UniProt Accession

A9PCA9; A9PCA9_POPTR

Genbank Protein ID

ABK94012.1; EEE82090.1

Protein Name

NPL4 family protein

Genbank Nucleotide ID

EF145895; CM000338

Gene Name

POPTRDRAFT_552641; POPTR_0002s22770g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s22770	POPTR_0002s22770.1	POPTR_0002s22770.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/ZnF/Other	23.91	6.00e-03	36.60	IUUC-Sce-106145

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MVMVRIRSRD GLERVSIDNT NITVSQLKTL IQNQLQIPIR SQTLSTNQSL LLAKSPSDLL 60
KFTDMSNPDT PLSSLSISHG SLIFLAYDGE RTIAGPAVRP AGSFGRKMTI DDLIAKQMRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGATGG TTCGAATCCG CAGCAGAGAC GGGCTGGAAC GCGTCTCCAT CGACAACACA 60
AACATCACAG TTTCCCAACT CAAAACTCTA ATCCAAAACC AACTCCAAAT CCCTATCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR007717--NPL4_C
IPR024682--Npl4_Ub-like_dom
IPR029071--Ubiquitin-rel_dom

Pfam

PF05021--NPL4
PF11543--UN_NPL4

Gene Ontology

GO:0005634--C:nucleus
GO:0043130--F:ubiquitin binding
GO:0031625--F:ubiquitin protein ligase binding
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0002s22770g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000460	Aegilops tauschii	64.41	9.00e-81	293.00
IUUC-Aml-002268	Ailuropoda melanoleuca	30.77	8.00e-15	74.70
IUUC-Atr-002939	Amborella trichopoda	74.23	3.00e-142	497.00
IUUC-Apl-003496	Anas platyrhynchos	29.10	3.00e-14	72.80
IUUC-Aca-005230	Anolis carolinensis	30.48	5.00e-15	75.50
IUUC-Aly-005413	Arabidopsis lyrata	78.66	2.00e-145	508.00
IUUC-Ath-006993	Arabidopsis thaliana	78.96	2.00e-157	547.00
IUUC-Acl-008208	Aspergillus clavatus	32.77	2.00e-05	44.30
IUUC-Afl-008574	Aspergillus flavus	32.77	6.00e-06	45.40
IUUC-Afu-008825	Aspergillus fumigatus	30.51	8.00e-05	42.00
IUUC-Ani-009495	Aspergillus nidulans	31.93	6.00e-05	42.00
IUUC-Ang-009762	Aspergillus niger	32.77	5.00e-06	45.80
IUUC-Aor-010199	Aspergillus oryzae	32.77	2.00e-05	44.30
IUUC-Ate-010592	Aspergillus terreus	32.77	2.00e-05	43.50
IUUC-Ame-011438	Astyanax mexicanus	36.17	4.00e-10	56.60
IUUC-Bgr-012124	Blumeria graminis	24.24	6.00e-04	38.90
IUUC-Bta-013312	Bos taurus	30.77	6.00e-15	75.50
IUUC-Bci-013648	Botrytis cinerea	27.56	1.00e-06	47.80
IUUC-Bdi-014326	Brachypodium distachyon	53.73	4.00e-95	340.00
IUUC-Bol-016294	Brassica oleracea	75.61	6.00e-153	533.00
IUUC-Bra-017023	Brassica rapa	77.13	1.00e-146	512.00
IUUC-Cel-018713	Caenorhabditis elegans	25.67	7.00e-08	51.60
IUUC-Cja-018869	Callithrix jacchus	31.28	2.00e-15	76.60
IUUC-Cfa-020757	Canis familiaris	30.77	7.00e-15	75.10
IUUC-Cpo-022390	Cavia porcellus	30.77	7.00e-15	75.10
IUUC-Csa-023366	Chlorocebus sabaeus	30.77	6.00e-15	75.50
IUUC-Cho-024455	Choloepus hoffmanni	30.26	5.00e-13	68.90
IUUC-Cin-025638	Ciona intestinalis	27.54	1.00e-11	64.30
IUUC-Csv-026310	Ciona savignyi	26.63	5.00e-09	55.50
IUUC-Cgl-026685	Colletotrichum gloeosporioides	25.89	1.40e-02	34.30
IUUC-Cne-026794	Cryptococcus neoformans	24.86	4.00e-02	33.10
IUUC-Cme-027248	Cyanidioschyzon merolae	35.10	1.00e-20	94.00
IUUC-Dre-027689	Danio rerio	29.74	1.00e-13	71.20
IUUC-Dno-030004	Dasypus novemcinctus	30.77	5.00e-15	75.50
IUUC-Dor-030585	Dipodomys ordii	30.93	7.00e-15	74.70
IUUC-Dse-031202	Dothistroma septosporum	26.97	3.00e-07	49.70
IUUC-Dme-032092	Drosophila melanogaster	25.13	5.00e-10	59.30
IUUC-Ete-033009	Echinops telfairi	32.00	3.00e-08	52.40
IUUC-Eca-034001	Equus caballus	30.26	1.00e-14	73.90
IUUC-Eeu-034485	Erinaceus europaeus	32.73	3.00e-08	53.10
IUUC-Fca-036128	Felis catus	30.77	8.00e-15	75.10
IUUC-Fal-037523	Ficedula albicollis	29.10	4.00e-14	72.80
IUUC-Fox-037802	Fusarium oxysporum	29.07	3.00e-03	36.60
IUUC-Fso-038152	Fusarium solani	24.36	4.00e-03	36.20
IUUC-Gmo-038486	Gadus morhua	31.41	2.00e-13	70.90
IUUC-Ggr-039916	Gaeumannomyces graminis	23.73	4.00e-04	39.70
IUUC-Gga-041208	Gallus gallus	29.10	4.00e-14	72.40
IUUC-Gac-042304	Gasterosteus aculeatus	28.57	5.00e-12	65.90
IUUC-Gma-044007	Glycine max	79.27	1.00e-141	495.00
IUUC-Ggo-045236	Gorilla gorilla	29.02	7.00e-10	58.50
IUUC-Hsa-046334	Homo sapiens	30.77	6.00e-15	75.50
IUUC-Hvu-047323	Hordeum vulgare	57.04	5.00e-43	166.00
IUUC-Itr-047878	Ictidomys tridecemlineatus	32.85	3.00e-11	62.00
IUUC-Lch-050302	Latimeria chalumnae	31.61	5.00e-15	75.90
IUUC-Lpe-051362	Leersia perrieri	54.63	1.00e-83	302.00
IUUC-Loc-052548	Lepisosteus oculatus	30.77	1.00e-13	71.20
IUUC-Lma-053092	Leptosphaeria maculans	26.05	2.00e-07	51.20
IUUC-Laf-053911	Loxodonta africana	30.77	7.00e-15	75.10
IUUC-Mcc-055830	Macaca mulatta	30.77	6.00e-15	75.50
IUUC-Mor-057189	Magnaporthe oryzae	26.70	1.00e-04	41.20
IUUC-Mpo-057366	Magnaporthe poae	24.84	4.00e-04	39.70
IUUC-Mtr-057834	Medicago truncatula	79.03	6.00e-136	476.00
IUUC-Mla-059190	Melampsora laricipopulina	23.53	3.00e-03	37.00
IUUC-Mga-060036	Meleagris gallopavo	29.10	4.00e-14	72.80
IUUC-Mvi-060275	Microbotryum violaceum	23.89	1.00e-03	38.10
IUUC-Mmr-061300	Microcebus murinus	30.77	7.00e-15	75.10
IUUC-Mdo-062911	Monodelphis domestica	30.77	6.00e-15	75.10
IUUC-Mmu-063916	Mus musculus	30.77	7.00e-15	75.10
IUUC-Mac-065601	Musa acuminata	55.65	2.00e-83	301.00
IUUC-Mpu-065912	Mustela putorius furo	30.77	8.00e-15	75.10
IUUC-Mlu-067965	Myotis lucifugus	30.77	5.00e-15	75.50
IUUC-Nfi-068465	Neosartorya fischeri	30.51	7.00e-05	42.00
IUUC-Ncr-068936	Neurospora crassa	24.69	2.00e-04	40.80
IUUC-Nle-069570	Nomascus leucogenys	30.77	6.00e-15	75.50
IUUC-Opr-071097	Ochotona princeps	30.77	6.00e-15	75.10
IUUC-Ont-071430	Oreochromis niloticus	29.74	2.00e-13	70.50
IUUC-Oan-073709	Ornithorhynchus anatinus	32.03	9.00e-09	54.30
IUUC-Ocu-074875	Oryctolagus cuniculus	30.26	2.00e-14	73.90
IUUC-Oba-075214	Oryza barthii	54.93	1.00e-90	325.00
IUUC-Obr-076758	Oryza brachyantha	64.73	3.00e-74	271.00
IUUC-Ogl-077665	Oryza glaberrima	54.93	1.00e-90	325.00
IUUC-Ogu-078899	Oryza glumaepatula	54.93	1.00e-90	325.00
IUUC-Oin-079167	Oryza indica	54.93	1.00e-90	325.00
IUUC-Olo-080451	Oryza longistaminata	64.29	3.00e-81	294.00
IUUC-Ome-081836	Oryza meridionalis	54.93	1.00e-90	325.00
IUUC-Oni-083019	Oryza nivara	54.93	1.00e-90	325.00
IUUC-Opu-083122	Oryza punctata	55.52	2.00e-91	328.00
IUUC-Oru-084900	Oryza rufipogon	54.93	1.00e-90	325.00
IUUC-Osa-086054	Oryza sativa	54.93	1.00e-90	325.00
IUUC-Ola-087077	Oryzias latipes	27.81	6.00e-12	65.50
IUUC-Olu-087601	Ostreococcus lucimarinus	44.54	1.00e-63	236.00
IUUC-Oga-088049	Otolemur garnettii	32.85	5.00e-11	62.40
IUUC-Oar-089678	Ovis aries	30.77	5.00e-15	75.50
IUUC-Ptr-091380	Pan troglodytes	30.77	5.00e-15	75.50
IUUC-Pan-092821	Papio anubis	29.38	3.00e-14	73.20
IUUC-Psi-093074	Pelodiscus sinensis	29.10	1.00e-13	70.90
IUUC-Pma-094102	Petromyzon marinus	28.42	4.00e-13	69.30
IUUC-Pno-094987	Phaeosphaeria nodorum	30.07	2.00e-08	54.70
IUUC-Ppa-095368	Physcomitrella patens	62.36	7.00e-101	359.00
IUUC-Pfo-097245	Poecilia formosa	28.57	3.00e-12	66.20
IUUC-Pab-098763	Pongo abelii	30.77	6.00e-15	75.10
IUUC-Ppe-101990	Prunus persica	79.82	7.00e-152	529.00
IUUC-Pva-102308	Pteropus vampyrus	31.18	3.00e-14	72.80
IUUC-Pgr-103626	Puccinia graminis	23.63	1.00e-04	41.20
IUUC-Pte-104100	Pyrenophora teres	27.45	1.00e-06	47.80
IUUC-Pyt-104482	Pyrenophora triticirepentis	27.45	1.00e-06	47.80
IUUC-Rno-105582	Rattus norvegicus	30.26	2.00e-14	73.90
IUUC-Sce-106145	Saccharomyces cerevisiae	24.26	3.00e-03	36.60
IUUC-Sha-106647	Sarcophilus harrisii	30.77	7.00e-15	75.10
IUUC-Sja-107972	Schizosaccharomyces japonicus	22.22	2.00e-04	40.00
IUUC-Spo-108281	Schizosaccharomyces pombe	22.67	5.00e-06	45.40
IUUC-Ssl-108617	Sclerotinia sclerotiorum	26.14	9.00e-06	45.10
IUUC-Smo-108933	Selaginella moellendorffii	60.55	1.00e-108	385.00
IUUC-Sit-110083	Setaria italica	54.33	7.00e-85	306.00
IUUC-Sly-111645	Solanum lycopersicum	77.61	1.00e-142	498.00
IUUC-Stu-112422	Solanum tuberosum	79.45	1.00e-153	535.00
IUUC-Sbi-113987	Sorghum bicolor	54.93	2.00e-91	328.00
IUUC-Sre-115095	Sporisorium reilianum	24.49	1.10e-02	35.00
IUUC-Ssc-116141	Sus scrofa	30.26	3.00e-14	72.80
IUUC-Tgu-117492	Taeniopygia guttata	29.41	2.00e-14	72.80
IUUC-Tru-118463	Takifugu rubripes	29.10	5.00e-12	65.90
IUUC-Tsy-118993	Tarsius syrichta	32.20	2.00e-08	53.50
IUUC-Tni-119896	Tetraodon nigroviridis	30.16	3.00e-13	69.70
IUUC-Tca-121169	Theobroma cacao	78.29	1.00e-143	501.00
IUUC-Tre-122046	Trichoderma reesei	25.00	3.00e-05	43.50
IUUC-Tae-123514	Triticum aestivum	55.52	7.00e-95	340.00
IUUC-Tme-127123	Tuber melanosporum	28.72	6.00e-09	55.50
IUUC-Tbe-127629	Tupaia belangeri	33.33	7.00e-07	48.50
IUUC-Ttr-128476	Tursiops truncatus	30.77	6.00e-15	75.50
IUUC-Uma-129492	Ustilago maydis	32.86	6.00e-03	35.80
IUUC-Vvi-131090	Vitis vinifera	76.38	5.00e-157	546.00
IUUC-Xtr-131786	Xenopus tropicalis	30.48	9.00e-15	74.70
IUUC-Xma-133997	Xiphophorus maculatus	28.57	1.00e-12	67.40
IUUC-Zma-134847	Zea mays	54.33	6.00e-89	320.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence