iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099627

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000348

Gene Name

POPTRDRAFT_569793; POPTR_0012s05000g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0012s05000	POPTR_0012s05000.1	POPTR_0012s05000.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.30e-10	41.1	341	382

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++d+++   +  l+CgH fh +C+++w        ++ +CP+C+
   Q: 341  CSICQDDYEEDgeVGKLDCGHGFHIQCIKQW------LGQKNTCPVCK 382
           ********4443488899*************......99********7 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MPVFAESSSS TPAAIADQIK LRKPRSQQEL QPISTETDPN PHASKSSKSN TIISSLFHSH 60
FSTTPPDQSK KKGATFRGLG CTAGAAQQVS VPAVIRSSAD WEGKKVKKKK GHPKRKKESL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTCTGTGCC AAAAATTTTA TTCACTCTTA TCATTCCATT TCCACAAAAT TCACTTTCAT 60
TCTCCCTCTG CCTCTCTCTG ATAAACAAAG CACAAAGATC ATGCCAGTTT TTGCAGAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0012s05000g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000531	Aegilops tauschii	56.91	6.00e-40	157.00
IUUC-Aly-006238	Arabidopsis lyrata	45.18	2.00e-73	268.00
IUUC-Ath-007538	Arabidopsis thaliana	44.27	5.00e-77	280.00
IUUC-Bol-015289	Brassica oleracea	41.04	2.00e-66	245.00
IUUC-Bra-017781	Brassica rapa	42.37	1.00e-69	256.00
IUUC-Gma-044193	Glycine max	45.89	3.00e-73	268.00
IUUC-Lpe-051518	Leersia perrieri	41.73	6.00e-44	171.00
IUUC-Mtr-058459	Medicago truncatula	43.67	9.00e-68	249.00
IUUC-Mac-064842	Musa acuminata	43.51	2.00e-54	205.00
IUUC-Oba-075787	Oryza barthii	49.19	4.00e-44	170.00
IUUC-Obr-076180	Oryza brachyantha	49.47	2.00e-44	171.00
IUUC-Ogl-077027	Oryza glaberrima	49.19	4.00e-44	170.00
IUUC-Ogu-078948	Oryza glumaepatula	44.35	5.00e-50	191.00
IUUC-Oin-079890	Oryza indica	49.19	4.00e-44	170.00
IUUC-Olo-080757	Oryza longistaminata	51.45	2.00e-37	147.00
IUUC-Ome-081811	Oryza meridionalis	44.76	2.00e-50	192.00
IUUC-Oni-082479	Oryza nivara	40.54	4.00e-45	174.00
IUUC-Opu-083327	Oryza punctata	41.31	2.00e-45	175.00
IUUC-Oru-085182	Oryza rufipogon	43.95	4.00e-49	187.00
IUUC-Osa-086292	Oryza sativa	44.35	5.00e-50	191.00
IUUC-Ola-087455	Oryzias latipes	35.29	1.00e-13	72.00
IUUC-Ppe-102027	Prunus persica	51.37	4.00e-89	320.00
IUUC-Ssl-108490	Sclerotinia sclerotiorum	43.08	2.00e-08	52.40
IUUC-Sit-110714	Setaria italica	41.09	7.00e-46	177.00
IUUC-Sbi-114151	Sorghum bicolor	50.54	3.00e-45	173.00
IUUC-Tca-121581	Theobroma cacao	53.10	6.00e-100	357.00
IUUC-Tae-124850	Triticum aestivum	43.67	5.00e-50	190.00
IUUC-Tur-126099	Triticum urartu	56.00	2.00e-40	157.00
IUUC-Vvi-131571	Vitis vinifera	47.88	9.00e-79	286.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence