iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015764

Ensembl Protein ID

Bo5g141600.1

UniProt Accession

A0A0D3CM26; A0A0D3CM26_BRAOL

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo5g141600	Bo5g141600.1	Bo5g141600.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.60e-31	109.6	74	145

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +peef+Cp+s+elMrdPvvl+sG+tyd+  I+kwl+sg++tcP+t+q l ++ l+Pnl +r++i++wc++ +
   Q: 74   CPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALTPNLLIRDMISKWCKTVG 145
           79******************************************************************9976 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MAKTDAFDSD PTAIAKAKEL KREMKKLLTN IEEEDGLSIR TIDQLQEALS AFKQATMRKM 60
AKSSSLEMLE TVSCPEEFRC PLSNELMRDP VVLASGQTYD KLFIQKWLSS GNRTCPKTQQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGAAGA CCGATGCATT CGATTCGGAT CCGACGGCGA TTGCCAAAGC CAAGGAACTG 60
AAGCGTGAGA TGAAGAAGCT TCTGACGAAC ATCGAGGAAG AGGATGGTTT GAGCATTCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000164	Aegilops tauschii	44.18	9.00e-84	303.00
IUUC-Aly-006420	Arabidopsis lyrata	88.77	0.00e+00	831.00
IUUC-Ath-007457	Arabidopsis thaliana	88.55	0.00e+00	811.00
IUUC-Bdi-014069	Brachypodium distachyon	51.54	3.00e-105	375.00
IUUC-Bra-017759	Brassica rapa	97.40	0.00e+00	855.00
IUUC-Hvu-047411	Hordeum vulgare	47.80	8.00e-81	293.00
IUUC-Lpe-050825	Leersia perrieri	50.65	4.00e-106	378.00
IUUC-Mac-065616	Musa acuminata	51.17	2.00e-109	389.00
IUUC-Oba-075311	Oryza barthii	50.67	2.00e-100	358.00
IUUC-Obr-076232	Oryza brachyantha	50.40	7.00e-101	360.00
IUUC-Ogl-077647	Oryza glaberrima	50.51	3.00e-106	378.00
IUUC-Ogu-078448	Oryza glumaepatula	50.51	1.00e-106	379.00
IUUC-Olo-080462	Oryza longistaminata	50.90	3.00e-106	378.00
IUUC-Ome-081796	Oryza meridionalis	50.64	4.00e-106	377.00
IUUC-Oni-082158	Oryza nivara	50.51	2.00e-106	379.00
IUUC-Opu-084131	Oryza punctata	51.16	7.00e-107	380.00
IUUC-Oru-084335	Oryza rufipogon	50.51	2.00e-106	379.00
IUUC-Osa-085556	Oryza sativa	50.51	2.00e-106	378.00
IUUC-Tae-125809	Triticum aestivum	48.06	5.00e-89	321.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence