iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017765

Ensembl Protein ID

Bra014206.1-P

UniProt Accession

M4DCJ1; M4DCJ1_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra014206	Bra014206.1	Bra014206.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.30e-35	121.0	13	86

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           ++p +f+CpIslelM+dPv++++G+tydr+sIe w+a+g+++cPvtr pl++ +l+Pn+tlrrliq+wc +n+s
   Q: 13   QIPYHFRCPISLELMTDPVTVSTGQTYDRTSIESWIATGNTSCPVTRLPLSDFTLIPNHTLRRLIQEWCVANRS 86
           5899******************************************************************9986 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MPGNLEPLDL GIQIPYHFRC PISLELMTDP VTVSTGQTYD RTSIESWIAT GNTSCPVTRL 60
PLSDFTLIPN HTLRRLIQEW CVANRSSGVE RIPTPKQPAD PISVRSLLSQ ASAISGTHVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGGGGA ACTTAGAACC GTTGGATCTC GGAATCCAAA TACCTTACCA TTTCAGATGC 60
CCAATCTCAT TGGAGCTTAT GACCGATCCA GTAACCGTCT CAACCGGTCA GACTTACGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005606	Arabidopsis lyrata	87.94	0.00e+00	668.00
IUUC-Ath-007142	Arabidopsis thaliana	87.00	0.00e+00	665.00
IUUC-Bol-015328	Brassica oleracea	98.35	0.00e+00	683.00
IUUC-Lpe-050781	Leersia perrieri	61.59	5.00e-53	200.00
IUUC-Mvi-060511	Microbotryum violaceum	39.22	1.00e-04	40.80
IUUC-Mac-064526	Musa acuminata	46.39	4.00e-56	211.00
IUUC-Oba-075168	Oryza barthii	75.86	5.00e-47	179.00
IUUC-Obr-076528	Oryza brachyantha	79.05	1.00e-46	180.00
IUUC-Ogl-077566	Oryza glaberrima	61.45	2.00e-50	192.00
IUUC-Ogu-078818	Oryza glumaepatula	61.45	3.00e-50	191.00
IUUC-Oin-079962	Oryza indica	61.45	3.00e-48	189.00
IUUC-Oni-082172	Oryza nivara	61.45	2.00e-50	192.00
IUUC-Opu-083930	Oryza punctata	63.64	1.00e-53	202.00
IUUC-Oru-084509	Oryza rufipogon	61.45	2.00e-50	192.00
IUUC-Osa-085902	Oryza sativa	61.45	2.00e-50	192.00
IUUC-Pop-100012	Populus trichocarpa	67.69	2.00e-151	528.00
IUUC-Ppe-101571	Prunus persica	66.27	1.00e-138	486.00
IUUC-Sit-110186	Setaria italica	61.64	5.00e-50	191.00
IUUC-Tca-121177	Theobroma cacao	67.92	5.00e-166	577.00
IUUC-Uma-129520	Ustilago maydis	34.88	5.00e-06	44.70
IUUC-Vvi-131329	Vitis vinifera	66.90	2.00e-146	511.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence