iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111917

Ensembl Protein ID

Solyc04g005020.2.1

UniProt Accession

K4BNA8; K4BNA8_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc04g005020.2	Solyc04g005020.2.1	Solyc04g005020.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.80e-30	103.4	334	363

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWD 29
           gH+ s+ cla  s++ll+sGs D+t+++W 
   Q: 334  GHKKSILCLAVvSNDLLCSGSADKTVRIWK 363
           8*********9988***************7 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MGFLPCSLLC QAKKKPLDSC DQTESRHLSS NSSSSLISLS SRSLSLSSRS FSSQPSLPSI 60
PSLSISSSQV EHLSNTFHHC LATLTGHSSY IFCLSIAEKH LYYGSSNGEI LVCDINSSKQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGATTTC TTCCATGTTC TTTGCTTTGT CAAGCAAAGA AAAAACCATT AGATTCTTGT 60
GATCAAACTG AGTCTAGACA TCTTTCCTCA AATTCTTCAT CATCATTAAT ATCATTATCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sly:101260421

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006722	Arabidopsis thaliana	57.07	4.00e-102	363.00
IUUC-Bra-018099	Brassica rapa	57.73	2.00e-105	374.00
IUUC-Lpe-050736	Leersia perrieri	46.05	3.00e-89	321.00
IUUC-Mac-064538	Musa acuminata	51.24	4.00e-98	350.00
IUUC-Obr-076628	Oryza brachyantha	43.44	4.00e-84	304.00
IUUC-Ogl-076961	Oryza glaberrima	44.65	8.00e-75	273.00
IUUC-Ogu-078745	Oryza glumaepatula	44.53	5.00e-80	290.00
IUUC-Oin-079355	Oryza indica	44.39	6.00e-74	270.00
IUUC-Olo-080540	Oryza longistaminata	43.20	2.00e-70	258.00
IUUC-Opu-083726	Oryza punctata	45.53	5.00e-83	300.00
IUUC-Oru-084480	Oryza rufipogon	44.13	3.00e-73	268.00
IUUC-Osa-086252	Oryza sativa	44.13	2.00e-73	268.00
IUUC-Sit-109950	Setaria italica	47.97	1.00e-74	272.00
IUUC-Stu-112480	Solanum tuberosum	89.33	0.00e+00	655.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence