iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007375

UUCD1 version

UUC-ArT-00609

Ensembl Protein ID

AT1G74410.1

UniProt Accession

Q8LBA0; Q4TU31; Q94A26; Q9CA72; NIPL2_ARATH

Genbank Protein ID

AAY57591.1; AAG52385.1; AEE35588.1; AAK91449.1; AAM10413.1; AAM64885.1

Protein Name

NEP1-interacting protein-like 2; RING-H2 finger protein ATL24

Genbank Nucleotide ID

DQ059105; AC011765; CP002684; AY050433; AY093797; AY087335

Gene Name

ATL24; At1g74410; F1M20.9

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT1G74410	AT1G74410.1	AT1G74410.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.90e-06	29.1	176	218

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl+d+k+g  +++lp C H+fh+ C+ kw        ++ +CP+Cr
   Q: 176  CTICLQDIKTGeiTRSLPkCDHTFHLVCVDKW------LIRHGSCPICR 218
           ********88777899999*************......**********8 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

May be involved in the early steps of the plant defense signaling pathway. Does not display E3 catalytic activity.

Protein Sequence
(Fasta)

MDTTLSPAVE AEQIADSTID TVSRLIAGVF SGALTGIFAM AGAFTGAVTG AVAGRAAQYG 60
VLRGAALGAV AGAILSVEVL EASRAYWYLE LSGSRGPSSM ADFVEQLFRG RLVDEQLMST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAAAAAA AAGGAGAGCT CCGTCTTCGT TGCTTTTTCG AGCGGTGCCT AGTCTCAACT 60
TCCATGGCTG ACATCTTACC TTCAAATTTT CTCAAACCAA CCAAAAAGCT TCTTCTCCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-0611--Plant defense
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0006952--P:defense response
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0010200--P:response to chitin

KEGG

ath:AT1G74410

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000628	Aegilops tauschii	48.67	1.00e-38	152.00
IUUC-Aly-006321	Arabidopsis lyrata	94.52	4.00e-99	354.00
IUUC-Bdi-014634	Brachypodium distachyon	50.68	1.00e-38	152.00
IUUC-Gma-043588	Glycine max	55.61	1.00e-49	188.00
IUUC-Hvu-047415	Hordeum vulgare	48.39	2.00e-31	127.00
IUUC-Lpe-051393	Leersia perrieri	51.35	2.00e-43	168.00
IUUC-Mtr-058669	Medicago truncatula	55.39	3.00e-48	184.00
IUUC-Oba-075137	Oryza barthii	53.54	4.00e-36	144.00
IUUC-Obr-076442	Oryza brachyantha	50.68	1.00e-41	163.00
IUUC-Ogl-077830	Oryza glaberrima	52.70	9.00e-44	169.00
IUUC-Ogu-078610	Oryza glumaepatula	52.11	8.00e-41	159.00
IUUC-Oin-079594	Oryza indica	52.70	9.00e-44	169.00
IUUC-Olo-080783	Oryza longistaminata	45.85	2.00e-34	138.00
IUUC-Ome-081475	Oryza meridionalis	53.81	6.00e-37	146.00
IUUC-Oni-082244	Oryza nivara	50.99	6.00e-41	159.00
IUUC-Opu-083541	Oryza punctata	45.70	3.00e-33	134.00
IUUC-Oru-085125	Oryza rufipogon	50.99	6.00e-41	159.00
IUUC-Osa-086024	Oryza sativa	52.70	9.00e-44	169.00
IUUC-Smo-109575	Selaginella moellendorffii	52.88	3.00e-45	174.00
IUUC-Sit-109877	Setaria italica	57.92	1.00e-37	148.00
IUUC-Sbi-114059	Sorghum bicolor	52.70	2.00e-44	171.00
IUUC-Tca-121623	Theobroma cacao	67.98	2.00e-55	207.00
IUUC-Tae-125399	Triticum aestivum	48.67	1.00e-38	152.00
IUUC-Tur-126124	Triticum urartu	48.00	2.00e-37	148.00
IUUC-Vvi-131189	Vitis vinifera	62.50	7.00e-52	196.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence