iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006173

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ring-H2 finger protein RHY1a

Genbank Nucleotide ID

GL348713

Gene Name

ARALYDRAFT_891906

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_104700.1	scaffold_104700.1	scaffold_104700.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.50e-07	31.3	201	242

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle+f +g  +++lpC H fh +Cl+ w       +    CP+Cr
   Q: 201  CSICLESFTKGdmLISLPCTHSFHSSCLNPW------LKACGDCPYCR 242
           ********66655889***************......99********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MTSASELFST RRSRPGRSDP DLESNTSSYR HHGTHHHRRH GTHHHNQRHD SDGCDPLRRP 60
TPRLRRFCHH PERRPIRDVQ GTGQYLNTDS TDTETQSSSF VNLNGSERLP GAVLLARARL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAATTCGGTG ATTGATCGGT GCATGACGAG CGCATCAGAA CTCTTCTCTA CACGAAGATC 60
ACGTCCGGGT CGATCCGACC CGGATTTAGA ATCGAACACT TCTTCTTATC GACACCACGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_891906

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003023	Amborella trichopoda	43.59	2.00e-19	88.60
IUUC-Bdi-014868	Brachypodium distachyon	35.93	1.00e-21	96.30
IUUC-Bol-015528	Brassica oleracea	68.40	6.00e-66	242.00
IUUC-Bra-016749	Brassica rapa	74.76	2.00e-71	260.00
IUUC-Hvu-047572	Hordeum vulgare	36.09	7.00e-22	96.30
IUUC-Mtr-058054	Medicago truncatula	48.34	2.00e-30	125.00
IUUC-Mac-064949	Musa acuminata	41.29	6.00e-20	90.10
IUUC-Oba-075741	Oryza barthii	36.53	7.00e-23	99.40
IUUC-Obr-076821	Oryza brachyantha	36.53	5.00e-23	100.00
IUUC-Ogl-077510	Oryza glaberrima	36.53	9.00e-23	99.80
IUUC-Oin-080050	Oryza indica	35.93	3.00e-22	98.20
IUUC-Olo-080497	Oryza longistaminata	34.73	8.00e-18	82.80
IUUC-Ome-081477	Oryza meridionalis	36.53	9.00e-23	99.80
IUUC-Oni-083119	Oryza nivara	35.93	3.00e-22	98.20
IUUC-Osa-086007	Oryza sativa	36.53	8.00e-23	99.80
IUUC-Pop-099358	Populus trichocarpa	46.98	7.00e-31	126.00
IUUC-Ppe-101691	Prunus persica	42.39	9.00e-27	113.00
IUUC-Sit-110752	Setaria italica	33.53	5.00e-21	94.00
IUUC-Sbi-114507	Sorghum bicolor	36.53	7.00e-23	100.00
IUUC-Tca-121654	Theobroma cacao	42.03	4.00e-30	124.00
IUUC-Tae-123420	Triticum aestivum	35.88	1.00e-21	95.90
IUUC-Vvi-131679	Vitis vinifera	42.75	6.00e-32	130.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence