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Tag Content
iUUCD ID IUUC-Aly-006495
Ensembl Protein ID fgenesh2_kg.4__2205__AT2G40830.1
UniProt Accession D7LFV0; D7LFV0_ARALL
Genbank Protein ID EFH56152.1
Protein Name Ring-H2 finger C1A
Genbank Nucleotide ID GL348716
Gene Name RHC1A; ARALYDRAFT_483145
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh2_kg.4__2205__AT2G40830.1 fgenesh2_kg.4__2205__AT2G40830.1 fgenesh2_kg.4__2205__AT2G40830.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 2.40e-07 31.8 192 233
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING
   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+++f   ++  + +pC+H++h dC+  w        ++ +CP+Cr
   Q: 192  CPVCKDEFelgSE-AKQMPCNHIYHSDCIVPW------LVQHNSCPVCR 233
           ********77544.889***************......**********8 PP
   
Organism Arabidopsis lyrata
Protein Sequence
(Fasta)
MSSSRNTHWC HRCQRAVQLH GQDPVCSYCG GGFVEELDMA EASPFDMFRA HSHRGVVERD 60
PTFDLMDAFS AFMRNRLAER SHDREIRGRT ISSGPENFPG LAPLLIFGGQ VPYRLSGDNA 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Aly-006495|E3,RING|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AGATTCTTCT AGAGTCAGTC CTTCTTCGTC ATCGTCTTCT TCCCCCAAAT CCTCTCGCTC 60
TAGGGTTTCT CCTCTCGATC CATTATTCTA GATGACGAGG TATTCTTCTG ATTGAGCTCC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Aly-006495|E3,RING|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50089--ZF_RING_2
Pfam

PF13639--zf-RING_2
SMART

SM00184--RING
Gene Ontology

GO:0005618--C:cell wall
GO:0008270--F:zinc ion binding
KEGG aly:ARALYDRAFT_483145
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000551 Aegilops tauschii 48.85 1.00e-57 215.00
IUUC-Aml-002001 Ailuropoda melanoleuca 46.67 5.00e-25 107.00
IUUC-Atr-002522 Amborella trichopoda 59.64 7.00e-46 176.00
IUUC-Apl-003778 Anas platyrhynchos 42.64 9.00e-27 112.00
IUUC-Aca-004365 Anolis carolinensis 45.95 7.00e-20 88.20
IUUC-Ath-006961 Arabidopsis thaliana 94.85 2.00e-145 507.00
IUUC-Ame-010626 Astyanax mexicanus 30.43 4.00e-27 114.00
IUUC-Bta-013190 Bos taurus 31.28 1.00e-27 116.00
IUUC-Bdi-014137 Brachypodium distachyon 49.48 9.00e-67 246.00
IUUC-Bol-015845 Brassica oleracea 71.69 6.00e-121 426.00
IUUC-Bra-017780 Brassica rapa 81.87 3.00e-123 433.00
IUUC-Cja-019575 Callithrix jacchus 47.62 5.00e-26 110.00
IUUC-Cfa-020142 Canis familiaris 46.67 4.00e-25 107.00
IUUC-Cpo-022451 Cavia porcellus 48.57 3.00e-26 111.00
IUUC-Csa-023433 Chlorocebus sabaeus 47.62 3.00e-26 111.00
IUUC-Cho-024643 Choloepus hoffmanni 42.86 9.00e-24 103.00
IUUC-Cne-026837 Cryptococcus neoformans 38.41 3.00e-20 92.40
IUUC-Dre-027400 Danio rerio 29.48 7.00e-27 113.00
IUUC-Dno-029349 Dasypus novemcinctus 47.62 6.00e-26 110.00
IUUC-Dor-030103 Dipodomys ordii 47.62 5.00e-26 110.00
IUUC-Ete-032392 Echinops telfairi 40.95 7.00e-22 97.10
IUUC-Eca-034240 Equus caballus 46.67 2.00e-25 108.00
IUUC-Fca-036192 Felis catus 29.03 1.00e-25 109.00
IUUC-Fal-037027 Ficedula albicollis 38.41 5.00e-27 114.00
IUUC-Gmo-038515 Gadus morhua 30.19 2.00e-28 118.00
IUUC-Gga-040682 Gallus gallus 41.86 3.00e-26 111.00
IUUC-Gac-041369 Gasterosteus aculeatus 38.41 2.00e-27 115.00
IUUC-Gma-043643 Glycine max 57.75 2.00e-91 328.00
IUUC-Ggo-044873 Gorilla gorilla 41.32 8.00e-25 106.00
IUUC-Hsa-046723 Homo sapiens 47.62 8.00e-26 110.00
IUUC-Hvu-047602 Hordeum vulgare 49.79 4.00e-62 230.00
IUUC-Itr-048435 Ictidomys tridecemlineatus 47.62 4.00e-26 110.00
IUUC-Lch-050673 Latimeria chalumnae 31.58 4.00e-28 117.00
IUUC-Lpe-051427 Leersia perrieri 50.95 9.00e-59 219.00
IUUC-Loc-052470 Lepisosteus oculatus 50.00 1.00e-23 102.00
IUUC-Laf-054384 Loxodonta africana 28.73 9.00e-24 103.00
IUUC-Mcc-055739 Macaca mulatta 47.62 8.00e-26 110.00
IUUC-Meu-056635 Macropus eugenii 30.25 5.00e-25 107.00
IUUC-Mtr-057711 Medicago truncatula 47.52 6.00e-63 233.00
IUUC-Mga-059349 Meleagris gallopavo 41.86 4.00e-26 111.00
IUUC-Mmr-060653 Microcebus murinus 47.62 6.00e-26 110.00
IUUC-Mdo-062442 Monodelphis domestica 42.64 1.00e-26 112.00
IUUC-Mmu-064196 Mus musculus 29.64 2.00e-26 112.00
IUUC-Mac-064627 Musa acuminata 41.64 5.00e-58 216.00
IUUC-Mpu-065917 Mustela putorius furo 46.67 4.00e-25 107.00
IUUC-Mlu-067495 Myotis lucifugus 48.57 8.00e-27 113.00
IUUC-Nle-069274 Nomascus leucogenys 47.62 1.00e-25 109.00
IUUC-Opr-070812 Ochotona princeps 28.94 9.00e-26 109.00
IUUC-Ont-071505 Oreochromis niloticus 29.59 2.00e-27 115.00
IUUC-Oan-073225 Ornithorhynchus anatinus 45.71 3.00e-25 108.00
IUUC-Ocu-074691 Oryctolagus cuniculus 29.32 5.00e-25 107.00
IUUC-Oba-075047 Oryza barthii 50.70 3.00e-66 244.00
IUUC-Obr-076829 Oryza brachyantha 48.45 3.00e-64 237.00
IUUC-Ogl-077378 Oryza glaberrima 50.35 1.00e-65 242.00
IUUC-Ogu-078709 Oryza glumaepatula 50.35 4.00e-66 243.00
IUUC-Oin-079400 Oryza indica 40.41 3.00e-38 151.00
IUUC-Olo-080762 Oryza longistaminata 50.70 3.00e-66 244.00
IUUC-Ome-081717 Oryza meridionalis 37.46 2.00e-56 212.00
IUUC-Oni-083090 Oryza nivara 50.35 4.00e-66 243.00
IUUC-Opu-083898 Oryza punctata 50.70 3.00e-66 244.00
IUUC-Oru-084267 Oryza rufipogon 50.70 2.00e-66 244.00
IUUC-Osa-086229 Oryza sativa 50.35 4.00e-66 243.00
IUUC-Ola-087338 Oryzias latipes 43.41 4.00e-27 114.00
IUUC-Oga-088067 Otolemur garnettii 42.64 5.00e-26 110.00
IUUC-Oar-089999 Ovis aries 31.40 3.00e-27 115.00
IUUC-Ptr-091473 Pan troglodytes 39.52 1.00e-24 106.00
IUUC-Pan-092424 Papio anubis 47.62 1.00e-25 109.00
IUUC-Psi-093171 Pelodiscus sinensis 40.56 3.00e-26 111.00
IUUC-Pfo-097402 Poecilia formosa 31.34 2.00e-28 119.00
IUUC-Pab-098466 Pongo abelii 39.52 1.00e-24 105.00
IUUC-Pop-099462 Populus trichocarpa 57.75 4.00e-88 317.00
IUUC-Pca-100442 Procavia capensis 48.57 4.00e-26 110.00
IUUC-Ppe-101324 Prunus persica 54.12 6.00e-82 296.00
IUUC-Pva-102881 Pteropus vampyrus 29.62 5.00e-27 114.00
IUUC-Rno-105203 Rattus norvegicus 46.67 2.00e-25 108.00
IUUC-Sha-107638 Sarcophilus harrisii 43.41 3.00e-27 114.00
IUUC-Sit-110648 Setaria italica 50.17 9.00e-66 242.00
IUUC-Sly-111407 Solanum lycopersicum 49.20 2.00e-68 252.00
IUUC-Stu-112467 Solanum tuberosum 50.80 3.00e-69 254.00
IUUC-Sbi-114297 Sorghum bicolor 49.65 3.00e-65 241.00
IUUC-Ssc-115917 Sus scrofa 31.40 6.00e-29 120.00
IUUC-Tgu-117502 Taeniopygia guttata 42.64 3.00e-26 111.00
IUUC-Tru-117681 Takifugu rubripes 30.51 1.00e-27 116.00
IUUC-Tsy-119630 Tarsius syrichta 42.86 1.00e-22 99.40
IUUC-Tni-120092 Tetraodon nigroviridis 30.38 4.00e-27 114.00
IUUC-Tca-121480 Theobroma cacao 60.54 3.00e-95 340.00
IUUC-Tae-124133 Triticum aestivum 47.72 2.00e-63 234.00
IUUC-Tur-125986 Triticum urartu 43.60 4.00e-52 199.00
IUUC-Tbe-127794 Tupaia belangeri 45.31 2.00e-15 75.50
IUUC-Ttr-128843 Tursiops truncatus 48.57 1.00e-25 109.00
IUUC-Uma-129414 Ustilago maydis 37.61 3.00e-16 79.70
IUUC-Vpa-130755 Vicugna pacos 43.81 4.00e-24 104.00
IUUC-Vvi-131335 Vitis vinifera 55.42 5.00e-84 303.00
IUUC-Xtr-132815 Xenopus tropicalis 30.92 3.00e-29 121.00
IUUC-Xma-133481 Xiphophorus maculatus 31.11 8.00e-29 120.00
Created Date 25-Jun-2017

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