iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126779

Ensembl Protein ID

TRIUR3_16754-P1

UniProt Accession

M7YH84; M7YH84_TRIUA

Genbank Protein ID

EMS46532.1

Protein Name

E3 ubiquitin-protein ligase ATL6

Genbank Nucleotide ID

KD273185

Gene Name

TRIUR3_16754

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_16754	TRIUR3_16754-T1	TRIUR3_16754-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.40e-09	37.8	124	166

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f   +d +++lp C H+fh+dC+  w        ++ +CPlCr
   Q: 124  CAVCLTEFedaDD-LRLLPhCSHAFHTDCIDPW------LETRTTCPLCR 166
           ********77455.*******************......**********8 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MGVRAHLLVV LCILVAGTST AQLLPPRGPA PQMKPPPFGR AMTMIITVVA VAIGVLFLLL 60
FFCAYVTQCR LVEDHGAPQE GSVAPGGVSR RGKRGLDPAV VATFPIVPYR KIKEHKIGSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGGTGC GCGCGCATCT CCTCGTCGTC CTTTGCATCC TCGTCGCCGG CACAAGCACG 60
GCTCAGCTTT TGCCGCCGCG CGGCCCGGCA CCGCAGATGA AGCCACCGCC GTTCGGGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0436--Ligase
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0016874--F:ligase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000694	Aegilops tauschii	84.25	2.00e-38	151.00
IUUC-Atr-002716	Amborella trichopoda	49.62	4.00e-31	127.00
IUUC-Aly-005713	Arabidopsis lyrata	38.30	6.00e-34	137.00
IUUC-Ath-006746	Arabidopsis thaliana	38.30	8.00e-34	136.00
IUUC-Ani-009491	Aspergillus nidulans	39.13	7.00e-11	62.00
IUUC-Bdi-014837	Brachypodium distachyon	67.97	2.00e-50	192.00
IUUC-Bra-017552	Brassica rapa	39.46	4.00e-34	137.00
IUUC-Cne-026954	Cryptococcus neoformans	52.00	6.00e-11	61.60
IUUC-Lpe-051027	Leersia perrieri	53.75	6.00e-44	170.00
IUUC-Oba-075308	Oryza barthii	58.78	5.00e-43	167.00
IUUC-Obr-076367	Oryza brachyantha	62.66	2.00e-53	202.00
IUUC-Ogl-077150	Oryza glaberrima	58.78	5.00e-43	167.00
IUUC-Ogu-078359	Oryza glumaepatula	52.40	6.00e-39	153.00
IUUC-Oin-079218	Oryza indica	58.23	9.00e-43	166.00
IUUC-Ome-081245	Oryza meridionalis	56.28	8.00e-44	170.00
IUUC-Oni-082249	Oryza nivara	74.19	3.00e-23	101.00
IUUC-Opu-083993	Oryza punctata	75.41	4.00e-23	101.00
IUUC-Oru-084953	Oryza rufipogon	74.19	3.00e-23	101.00
IUUC-Osa-085314	Oryza sativa	58.33	2.00e-40	158.00
IUUC-Pop-098838	Populus trichocarpa	37.08	1.00e-32	133.00
IUUC-Ppe-101746	Prunus persica	40.69	1.00e-34	139.00
IUUC-Sit-109765	Setaria italica	57.81	8.00e-53	199.00
IUUC-Sly-111277	Solanum lycopersicum	40.91	1.00e-32	132.00
IUUC-Stu-112280	Solanum tuberosum	39.00	3.00e-33	135.00
IUUC-Sbi-114658	Sorghum bicolor	70.73	6.00e-32	130.00
IUUC-Tca-121082	Theobroma cacao	35.46	1.00e-33	136.00
IUUC-Tae-125061	Triticum aestivum	91.47	2.00e-106	377.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence