iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-042958

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000837

Gene Name

LOC100810577; GLYMA_04G058300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA04G06170	GLYMA04G06170.1	GLYMA04G06170.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.20e-75	255.6	178	483

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaq 93
           +Gl N gN+C+ N vLQcLs++++l  +lle  +++++ ++     + ++l+++++ +e++   +++a+sp ++l+ l +++  +   +q+Da+
   Q: 178  CGLLNCGNSCFANVVLQCLSFTRPLIAFLLEkGHHRECCHN-----DWCFLCEFETHVEKV-RLSSQAFSPMNILSRLPNISGTLGYGRQEDAH 265
           7******************************5455555554.....67*************.88999*************************** PP
   S: 94   EflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkesl 187
           Ef++f +d++++ +         +e++ +       +   + +++++li+++F+g+l+s+++c ec+++s+++e+++dl+++++g+      sl
   Q: 266  EFMRFSIDAMQSVC--------LDEFGGE-------KVVPPRNQETTLIQHIFGGHLQSEVICTECEKNSNQYENMMDLTVEIHGDAA----SL 340
           **************........3444444.......788999*********************************************6....8* PP
   S: 188  qdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLi 281
           ++cL++ft++e l+g+n+y+c+ ck++++a k+l++k+ P++L++ LkRf    + ++  k+nk+v+fp++Ldlsp++++  ++   +++Y+L+
   Q: 341  EECLDQFTAKEWLHGDNMYKCDGCKGYVKAWKRLTVKQAPNILTIALKRF----QSGRFGKLNKRVTFPETLDLSPYMSEVGDG---SDIYKLY 427
           **************************************************....346668********************7776...79***** PP
   S: 282  avvvHsGslss...GHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           avvvH   l+    GHY++y+k+  g+W+++dD kV++v+ eevl+   + aY+l+Y r
   Q: 428  AVVVHIDMLNAsffGHYICYIKDFCGNWYRIDDWKVSSVELEEVLS---QGAYMLLYSR 483
           ******95554455********************************...********87 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MLLSGGVSDL KWILQFVFYA FVLAIGLHAL LKNTASKYFD LDATFHAHAI PGLLMDHSLC 60
AVCRNPANKK CSRCKSVRYC SQACQQMHWK SEHKVRCKEF QGSSTSVMMN LAQTEVTNRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCACTAATCC AAACAAACAG AAAGCACCGT CCATGTGCAA CGAATAATTG CTTGTGCTTC 60
GAGAAAGGGA AAATGAAAAA GCAAGATTGA AAGAGCAGGC AAAACAAAAC AGAAAACGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

gmx:100810577

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001055	Aegilops tauschii	57.05	2.00e-146	513.00
IUUC-Aly-005863	Arabidopsis lyrata	65.15	0.00e+00	661.00
IUUC-Bdi-014660	Brachypodium distachyon	58.96	2.00e-154	540.00
IUUC-Bol-015083	Brassica oleracea	63.54	0.00e+00	633.00
IUUC-Bra-017569	Brassica rapa	64.52	0.00e+00	636.00
IUUC-Cne-027049	Cryptococcus neoformans	32.55	4.00e-37	149.00
IUUC-Hvu-047620	Hordeum vulgare	53.22	3.00e-161	562.00
IUUC-Lpe-051385	Leersia perrieri	57.61	5.00e-137	482.00
IUUC-Mac-065096	Musa acuminata	73.70	5.00e-169	588.00
IUUC-Obr-076763	Oryza brachyantha	65.07	9.00e-166	577.00
IUUC-Opu-083135	Oryza punctata	63.93	2.00e-163	570.00
IUUC-Ppa-095982	Physcomitrella patens	48.72	3.00e-158	552.00
IUUC-Smo-109625	Selaginella moellendorffii	54.19	7.00e-145	508.00
IUUC-Sly-111333	Solanum lycopersicum	65.71	0.00e+00	701.00
IUUC-Tca-121521	Theobroma cacao	61.64	0.00e+00	765.00
IUUC-Tae-125225	Triticum aestivum	52.15	9.00e-158	551.00
IUUC-Tur-126423	Triticum urartu	58.21	1.00e-147	517.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence